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L3_072_000M1_scaffold_1593

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1593_1
unknown

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comp(606..707)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_072_000M1_scaffold_1593_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(778..3168)
DNA (2391bp) protein (797aa)
Fibronectin type III domain protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G814_9PROT
Fibronectin type III domain protein {ECO:0000313|EMBL:CDE22152.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1593_3
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3922..4791)
DNA (870bp) protein (290aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FUF1_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE18246.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC transporter permease
L3_072_000M1_scaffold_1593_4
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4804..5745)
DNA (942bp) protein (314aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G224_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE20991.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC-type carbohydrate transport system, permease component
L3_072_000M1_scaffold_1593_5
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5768..7474)
DNA (1707bp) protein (569aa)
Extracellular solute-binding protein family 1 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G5F3_9PROT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDE22360.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_1593_6
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7492..8724)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I962_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38520.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
glycoside hydrolase family 37
L3_072_000M1_scaffold_1593_7
unknown

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comp(8766..11447)
DNA (2682bp) protein (894aa)

This feature has no annotations

L3_072_000M1_scaffold_1593_8
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11873..14362)
DNA (2490bp) protein (830aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FXB0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE18357.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_1593_9
unknown

Not on your lists

comp(14375..14521)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_072_000M1_scaffold_1593_10
unknown

Not on your lists

comp(14609..14911)
DNA (303bp) protein (101aa)

This feature has no annotations

L3_072_000M1_scaffold_1593_11
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14892..16325)
DNA (1434bp) protein (478aa)
Listeria/Bacterioides repeat n=1 Tax=Coprococcus catus GD/7 RepID=D4JAW7_9FIRM
Listeria/Bacterioides repeat
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CBK81488.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_072_000M1_scaffold_1593_12
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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comp(16422..17699)
DNA (1278bp) protein (426aa)
Putative uncharacterized protein id=3079957 bin=GWF2_Planctomycete_41_51 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=GWF2_Lentisphaerae_45_14_curated
L3_072_000M1_scaffold_1593_13
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(17696..18718)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein id=4447431 bin=GWC2_Clostridiales_40_7 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
putative dehydrogenase
Tax=GWC2_Clostridiales_40_7_curated
L3_072_000M1_scaffold_1593_14
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18726..19721)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W0D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD02850.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
putative oxidoreductase
L3_072_000M1_scaffold_1593_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19741..20688)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63878.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
oxidoreductase
L3_072_000M1_scaffold_1593_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21015..21800
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G7K6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21992.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
AraC family transcriptional regulator
Displaying 16 items

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