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L3_072_000M1_scaffold_1072_20

Organism: dasL3_072_000M1_concoct_101_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 17089..17805

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K557_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 240.0
  • Bit_score: 263
  • Evalue 1.10e-67
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 240.0
  • Bit_score: 263
  • Evalue 1.60e-67
sigF; RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 233.0
  • Bit_score: 213
  • Evalue 3.80e-53

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Taxonomy

Subdoligranulum sp. CAG:314 → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
TTGCTTGACAGAGAGACAACCGAAAAACTTATTCAGGACGCGCAAAACGGCGATAACGACGCTAAACAACGCCTGATAAGCGAAAATTCGCCGCTTATCAAGTGTGTTGTAAAGCGTTTTAAGGGCAGGGGCGTCGAATACGATGATTTGTATCAGCTGGGTTCTATAGGAATGCTGAAAGCCATCGAAAACTTTTCGTGCGATAAAGGCGTTCGTTTTTCGACGTATGCCGTTCCCATGATAATGGGCGAAATCAAACGCTATCTGCGTGATGACGGACTTATAAAAGTGTCCAGGCTTATCAAGTCGCTGTCCTATAAAATTGCCTGTTTTGTCGAAGATTACGTCCGCAAAAACGACAAAAGTCCGGAAGTCGGCGAAATTGCGGCTGCGCTCGGCGTGGAAGCGCAGGAAGTGGTTTTTGCCATGGATTCGGGCAAAGCACCGCTTTCCATTTACGATAAGGGCGAGGACGAAAGCGGACAGTCAATCATGGAAAAGCTGCCCGCAAGCATTGACGGCGACGACCAGCTGGACAAAATAATCGTCCGAGAAGCAATACGCAAGCTTAACGAACGCGAACGCAAGCTTGTAATCATGCGCTACTACCGCGATCTTACTCAAAGCGAAATAGCAAAAGAATTAAATGTTTCGCAAGTTCAGATTTCGCGCATGGAAACCAAAATTATAAAAAAAATCAAAGAGGGATTCAACTGA
PROTEIN sequence
Length: 239
LLDRETTEKLIQDAQNGDNDAKQRLISENSPLIKCVVKRFKGRGVEYDDLYQLGSIGMLKAIENFSCDKGVRFSTYAVPMIMGEIKRYLRDDGLIKVSRLIKSLSYKIACFVEDYVRKNDKSPEVGEIAAALGVEAQEVVFAMDSGKAPLSIYDKGEDESGQSIMEKLPASIDGDDQLDKIIVREAIRKLNERERKLVIMRYYRDLTQSEIAKELNVSQVQISRMETKIIKKIKEGFN*