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L3_072_000M1_scaffold_1909_5

Organism: dasL3_072_000M1_concoct_101_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 2754..3188

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Clostridium tyrobutyricum RepID=UPI000373732E similarity UNIREF
DB: UNIREF100
  • Identity: 27.4
  • Coverage: 146.0
  • Bit_score: 63
  • Evalue 1.30e-07
Sigma-70, region 4 type 2 {ECO:0000313|EMBL:CDL92496.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.4
  • Coverage: 146.0
  • Bit_score: 63
  • Evalue 1.90e-07
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 135.0
  • Bit_score: 57
  • Evalue 2.70e-06

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Taxonomy

Clostridium tyrobutyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 435
ATGAAAAAGAAAGTCTATTACAAACTCAATCGCTACAAAGTAGCAAAAGTAGAAGTAGAAAGCGTAGAACAGGAACAAGCAGTAAAAATACTGAACCGTGAAACGGATCGCTTTGCAAAGTCGGAGGATACATATTACGAAAAATGTTCTTCACTCGATGAGATGTATGAAGAAACAGGTTTCGAGCCTGCGGATGATACGCCGTCGCCGGAAGAACAGATGATACGTGCCAGCGAACAGAACGAATTGAAAGTACGGATACAAAAGGCCATAGAGAAGCTGAAACCTCGTCAACGAGAAATGGTACTAATGATTTTCTTTGAAGAAAAAACGCAAGCGGAGGTTGCCGAATATTACGGTATTACCGAGGCGGCAGTATCGCAGTCAATGGATAGGATTTATATGTCACTCAAAAAAATTTTGAAAAAAAATTAA
PROTEIN sequence
Length: 145
MKKKVYYKLNRYKVAKVEVESVEQEQAVKILNRETDRFAKSEDTYYEKCSSLDEMYEETGFEPADDTPSPEEQMIRASEQNELKVRIQKAIEKLKPRQREMVLMIFFEEKTQAEVAEYYGITEAAVSQSMDRIYMSLKKILKKN*