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L3_072_000M1_scaffold_1909

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1909_1
unknown

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3..134
DNA (132bp) protein (44aa)

This feature has no annotations

L3_072_000M1_scaffold_1909_2
Firmicutes bacterium CAG:345, Firmicutes, Bacteria

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366..1343
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:345 RepID=R6YYQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD23397.1}; TaxID=1263020 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:345.;"
hypothetical protein
L3_072_000M1_scaffold_1909_3
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1526..2125
DNA (600bp) protein (200aa)
LexA repressor {ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|SAAS:SAAS00008054};; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
SOS regulatory protein LexA (EC:3.4.21.88)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4U6_9FIRM
L3_072_000M1_scaffold_1909_4
unknown

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2276..2464
DNA (189bp) protein (63aa)

This feature has no annotations

L3_072_000M1_scaffold_1909_5
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2754..3188
DNA (435bp) protein (145aa)
RNA polymerase subunit sigma-24 n=1 Tax=Clostridium tyrobutyricum RepID=UPI000373732E
Sigma-70, region 4 type 2 {ECO:0000313|EMBL:CDL92496.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
FliA/WhiG family RNA polymerase sigma factor
L3_072_000M1_scaffold_1909_6
unknown

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3291..3650
DNA (360bp) protein (120aa)

This feature has no annotations

L3_072_000M1_scaffold_1909_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3647..16039
DNA (12393bp) protein (4131aa)
N-6 DNA methylase superfamily protein (Modular protein) n=3 Tax=Clostridium difficile RepID=U3UZJ7_CLODI
N-6 DNA methylase superfamily protein (Modular protein) {ECO:0000313|EMBL:CCK94191.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
hypothetical protein
L3_072_000M1_scaffold_1909_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16036..16794
DNA (759bp) protein (253aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
DNA methylase family protein n=7 Tax=Clostridium difficile RepID=T3HVV0_CLODI
DNA modification methylase
L3_072_000M1_scaffold_1909_9
unknown

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16809..16958
DNA (150bp) protein (50aa)

This feature has no annotations

L3_072_000M1_scaffold_1909_10
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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16945..18621
DNA (1677bp) protein (559aa)
DNA repair protein RadC n=2 Tax=Fusobacterium RepID=E5BI39_9FUSO
PF04002 family protein {ECO:0000313|EMBL:EIJ68671.1}; TaxID=1095747 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. funduliforme ATCC 51357.;"
traC; TraC DNA primase and ssDNA binding protein
L3_072_000M1_scaffold_1909_11
unknown

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18640..19089
DNA (450bp) protein (150aa)

This feature has no annotations

L3_072_000M1_scaffold_1909_12
unknown

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19109..19501
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying 12 items

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