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L3_072_000M1_scaffold_3652_1

Organism: dasL3_072_000M1_concoct_101_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(389..1072)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GK35_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 222.0
  • Bit_score: 278
  • Evalue 4.20e-72
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 222.0
  • Bit_score: 278
  • Evalue 5.90e-72
sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 224.0
  • Bit_score: 228
  • Evalue 1.80e-57

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Taxonomy

Firmicutes bacterium CAG:552 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGATAATCGAAACGTTGCTTTCTTTCTTTTCCGGCATATTCTGTTTTTCCGCATACGTCAGCGGCGGCGGGTCATTTCCTCCGCCTCTTTCCGCCGAGGAAGAACGAGAGTGTATTTACGCTTGCAAAAAAGGCGACATGAAGGCGCGGGAAAAGCTTATAAAGCACAATCTGCGTCTTGTAGCTCACGTGGTTAAAAAGTATTCGCTTGCGGGAGAAGCGGACGACCTTATTTCCATAGGCACCATGGGGCTTATAAAGGGCATAGAAACGTACGAATTCGGAAAAGGTTCGCTGCTGGCGACTTATGCGGCGAAGTGCATCGACAACGAAATTCTGATGTACATACGAGCAAACAAAAAGCGGCGCGGCGACGTTTCGCTGTCCGACCCTGCGGGTGTGGACAAAGACGGCAACGAAATTACGCTTATGGACGTCATTCCCTCTCCCGACGAGGGCGTTTTTACGCGGGTGGAAAACGCCGTTACGATAGGTCAGATAGAAGAAATAATGAAGTATCATCTGAAACCGCGCGAGAGAAAAGTCATGGAGATGAGATACGGACTAAACGGGCAAAACGCACACACTCAGCTGGAAGTTGCCGAAAAACTGGACATATCGCGCTCGTACGTGTCGAGAATAGAAAAAAAAGCAATACGTAAAATATCCGATTTTATACTCTGA
PROTEIN sequence
Length: 228
MIIETLLSFFSGIFCFSAYVSGGGSFPPPLSAEEERECIYACKKGDMKAREKLIKHNLRLVAHVVKKYSLAGEADDLISIGTMGLIKGIETYEFGKGSLLATYAAKCIDNEILMYIRANKKRRGDVSLSDPAGVDKDGNEITLMDVIPSPDEGVFTRVENAVTIGQIEEIMKYHLKPRERKVMEMRYGLNGQNAHTQLEVAEKLDISRSYVSRIEKKAIRKISDFIL*