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L3_072_000M1_scaffold_3652

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3652_1
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(389..1072)
DNA (684bp) protein (228aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GK35_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
sporulation sigma factor SigK
L3_072_000M1_scaffold_3652_2
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1436..2380
DNA (945bp) protein (315aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QCV7_9FIRM
L3_072_000M1_scaffold_3652_3
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2405..3784
DNA (1380bp) protein (460aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FVJ5_9FIRM
L3_072_000M1_scaffold_3652_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3797..4582
DNA (786bp) protein (262aa)
Heterodisulfide reductase, subunit B (EC:1.8.98.1)
Cysteine-rich domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCK0_9FIRM
Cysteine-rich domain protein {ECO:0000313|EMBL:EET61664.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_072_000M1_scaffold_3652_5

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4575..4961
DNA (387bp) protein (129aa)
Heterodisulfide reductase, C subunit family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW73_9CLOT
CoB--CoM heterodisulfide reductase iron-sulfur subunit C 1 {ECO:0000313|EMBL:AHF24717.1}; TaxID=1393612 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig783.;"
hypothetical protein
L3_072_000M1_scaffold_3652_6
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4986..6977
DNA (1992bp) protein (664aa)
FAD dependent oxidoreductase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FKP6_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCY04209.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
FAD dependent oxidoreductase
L3_072_000M1_scaffold_3652_7
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6965..7432
DNA (468bp) protein (156aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FGQ1_9FIRM
Methyl-viologen-reducing hydrogenase delta subunit {ECO:0000313|EMBL:CCY04210.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
Coenzyme F420-reducing hydrogenase, delta subunit
L3_072_000M1_scaffold_3652_8
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7419..8402
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VTV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83952.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L3_072_000M1_scaffold_3652_9
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8405..9427
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FYV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20105.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hypothetical protein
L3_072_000M1_scaffold_3652_10
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9424..10251
DNA (828bp) protein (276aa)
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXY1_9FIRM
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases {ECO:0000313|EMBL:CDE20104.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L3_072_000M1_scaffold_3652_11
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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10263..10937
DNA (675bp) protein (225aa)
CO dehydrogenase/acetyl-CoA synthase alpha subunit n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6V2P2_9FIRM
CO dehydrogenase/acetyl-CoA synthase alpha subunit {ECO:0000313|EMBL:CDC77032.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
CO dehydrogenase/acetyl-CoA synthase alpha subunit
L3_072_000M1_scaffold_3652_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10950..11963
DNA (1014bp) protein (338aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L248_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CDE82715.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Displaying 12 items

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