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L3_072_000M1_scaffold_9606

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_9606_1
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1232
DNA (1230bp) protein (410aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
seryl-tRNA synthase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Clostridium sp. CAG:138 RepID=R6AIA8_9CLOT
L3_072_000M1_scaffold_9606_2
unknown

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1434..1922
DNA (489bp) protein (163aa)
Glycopeptide antibiotics resistance protein id=7720938 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
L3_072_000M1_scaffold_9606_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1919..3688
DNA (1770bp) protein (590aa)
GTPase HflX n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5T0_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
GTP-binding proten HflX
L3_072_000M1_scaffold_9606_4
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3685..4317
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z5R7_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR71926.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_072_000M1_scaffold_9606_5
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4404..5384
DNA (981bp) protein (327aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape ptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P5P4_9FIRM
L3_072_000M1_scaffold_9606_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5474..5956
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QI80_9FIRM
ybaK/ebsC protein
L3_072_000M1_scaffold_9606_7
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6165..7238)
DNA (1074bp) protein (358aa)
Phage integrase family n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GYW9_9FIRM
Phage integrase family {ECO:0000313|EMBL:CCY17776.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Site-specific recombinase XerD
L3_072_000M1_scaffold_9606_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7479..8090
DNA (612bp) protein (204aa)
Predicted Zn peptidase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4Y6_9FIRM
Predicted Zn peptidase
Predicted Zn peptidase {ECO:0000313|EMBL:CBL14681.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_072_000M1_scaffold_9606_9
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8152..8502)
DNA (351bp) protein (117aa)
DNA-binding helix-turn-helix protein n=1 Tax=Enterococcus faecalis 13-SD-W-01 RepID=S4CZS5_ENTFL
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EPH96514.1}; TaxID=1260356 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 13-SD-W-01.;"
transcriptional regulator
L3_072_000M1_scaffold_9606_10
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8653..8898
DNA (246bp) protein (82aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6L6_9CLOT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EXJ23269.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
XRE family transcriptional regulator
L3_072_000M1_scaffold_9606_11
unknown

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8895..9134
DNA (240bp) protein (80aa)

This feature has no annotations

L3_072_000M1_scaffold_9606_12
unknown

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9131..9334
DNA (204bp) protein (68aa)

This feature has no annotations

L3_072_000M1_scaffold_9606_13
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9331..9483
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0IB73_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB21887.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
Displaying 13 items

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