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L3_072_000M1_scaffold_8906

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_8906_1
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(62..229)
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=B0MQ31_9FIRM
Domain of Unknown Function (DUF1540).
Uncharacterized protein {ECO:0000313|EMBL:CDC44676.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_8906_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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316..1230
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Pseudouridine synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNM2_9FIRM
pseudouridylate synthase
L3_072_000M1_scaffold_8906_3
unknown

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comp(1190..1393)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_072_000M1_scaffold_8906_4
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1470..2360
DNA (891bp) protein (297aa)
Serine protease n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QYQ9_9CLOT
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AEY65761.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_072_000M1_scaffold_8906_5
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2357..2908
DNA (552bp) protein (184aa)
UPF0340 protein HMPREF0262_03574 n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2ENE6_CLOS4
UPF0340 protein HMPREF0262_03574 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_072_000M1_scaffold_8906_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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3260..4312
DNA (1053bp) protein (351aa)
Metallophosphoesterase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK29_NAKMY
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACV76712.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
L3_072_000M1_scaffold_8906_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4406..4771)
DNA (366bp) protein (122aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0I5_CLOSW
DNA-binding protein {ECO:0000313|EMBL:KEZ91491.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
DtxR family iron (metal) dependent repressor
L3_072_000M1_scaffold_8906_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(4952..5422)
DNA (471bp) protein (157aa)
Tyrosine recombinase XerC n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DA98_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
xerC; tyrosine recombinase XerC
Displaying 8 items

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