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L3_072_000M1_scaffold_4202

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4202_1
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..278)
DNA (276bp) protein (92aa)
Protein-export membrane protein SecF n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J545_DESRM
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L3_072_000M1_scaffold_4202_2
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(281..1573)
DNA (1293bp) protein (431aa)
Protein translocase subunit SecD n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A277_MAHA5
protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_072_000M1_scaffold_4202_3
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1641..2165)
DNA (525bp) protein (175aa)
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R057_OWEHD
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:AEV33723.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
L3_072_000M1_scaffold_4202_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2206..3567)
DNA (1362bp) protein (454aa)
Radical SAM domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKR4_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDE51898.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
arylsulfatase regulator
L3_072_000M1_scaffold_4202_5
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3823..4242)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5E842_9CLOT
Protein of unknown function DUF3792, transmembrane
Uncharacterized protein {ECO:0000313|EMBL:CCX88643.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
L3_072_000M1_scaffold_4202_6
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4312..5538)
DNA (1227bp) protein (409aa)
HtrA2 peptidase (EC:3.4.21.108)
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FCP9_9FIRM
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain {ECO:0000313|EMBL:CDE12436.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L3_072_000M1_scaffold_4202_7
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5565..7034)
DNA (1470bp) protein (490aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYE2_MAHA5
integral membrane sensor signal transduction histidine kinase
L3_072_000M1_scaffold_4202_8
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7045..7725)
DNA (681bp) protein (227aa)
Response regulator n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRI7_CLOSH
Two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AGC68163.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_072_000M1_scaffold_4202_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7863..10226)
DNA (2364bp) protein (788aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endonuclease MutS2 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILL5_9FIRM
MutS2 family protein
L3_072_000M1_scaffold_4202_10
unknown

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comp(10269..10676)
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying 10 items

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