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L3_072_000M1_scaffold_4743

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4743_1
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..509
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IQ99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53498.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_072_000M1_scaffold_4743_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(804..1829)
DNA (1026bp) protein (342aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NG96_CLOSV
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EDS06382.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
NAD-dependent epimerase/dehydratase
L3_072_000M1_scaffold_4743_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1995..2576
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KF82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35839.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator, TetR family
L3_072_000M1_scaffold_4743_4
Pontibacillus litoralis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2640..3998
DNA (1359bp) protein (453aa)
tRNA (uracil-5-) -methyltransferase (EC:2.1.1.35)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:413 RepID=R6NCE4_9CLOT
RNA methyltransferase {ECO:0000313|EMBL:KGX88222.1}; TaxID=1385512 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus litoralis JSM 072002.;"
L3_072_000M1_scaffold_4743_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4313..6112
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S184_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49071.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Superfamily I DNA and RNA helicases
L3_072_000M1_scaffold_4743_6
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6114..6662
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B33AF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA48589.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_072_000M1_scaffold_4743_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6792..7592
DNA (801bp) protein (267aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NWB8_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDC16428.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
HAD-superfamily hydrolase, subfamily IIB
L3_072_000M1_scaffold_4743_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7603..8220
DNA (618bp) protein (206aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:58 RepID=R6SG48_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC45592.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_072_000M1_scaffold_4743_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8220..8654
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZBQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95901.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
N-acetyltransferase GCN5
L3_072_000M1_scaffold_4743_10
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8745..9617
DNA (873bp) protein (291aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Aldose 1-epimerase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIH8_9CLOT
aldose 1-epimerase
Displaying 10 items

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