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L3_072_000M1_scaffold_4852

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4852_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..708)
DNA (708bp) protein (236aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDV1_9FIRM
L3_072_000M1_scaffold_4852_2
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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918..1607
DNA (690bp) protein (230aa)
Predicted Zn-dependent protease n=1 Tax=Blautia sp. CAG:237 RepID=R6KV84_9FIRM
Predicted Zn-dependent protease {ECO:0000313|EMBL:CDB77420.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Predicted Zn-dependent protease
L3_072_000M1_scaffold_4852_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1702..2241
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75899.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_072_000M1_scaffold_4852_4
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2322..3059
DNA (738bp) protein (246aa)
Putative O-methyltransferase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FNS5_9CLOT
Putative O-methyltransferase {ECO:0000313|EMBL:EMS73552.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
type 11 methyltransferase
L3_072_000M1_scaffold_4852_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3061..3885
DNA (825bp) protein (275aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium sp. CAG:75 RepID=R5SM65_9CLOT
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L3_072_000M1_scaffold_4852_6
unknown

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4509..5288
DNA (780bp) protein (260aa)

This feature has no annotations

L3_072_000M1_scaffold_4852_7
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5406..6335)
DNA (930bp) protein (310aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Cysteine synthase A n=2 Tax=Ruminococcus RepID=D4LBL9_RUMC1
L3_072_000M1_scaffold_4852_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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6837..7802
DNA (966bp) protein (322aa)
ABC transporter substrate binding protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQ39_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:CDB02728.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ABC transporter substrate-binding protein
L3_072_000M1_scaffold_4852_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7830..8783
DNA (954bp) protein (318aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM22_CELLD
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ85802.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_000M1_scaffold_4852_10
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8785..9408
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V5A3_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47932.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
Displaying 10 items

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