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L3_072_000M1_scaffold_2116

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2116_1
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..1002)
DNA (1002bp) protein (334aa)
Cell wall endopeptidase n=1 Tax=Bacillus megaterium (strain DSM 319) RepID=D5DGN8_BACMD
lytF; cell wall endopeptidase
Cell wall endopeptidase {ECO:0000313|EMBL:ADF39879.1}; TaxID=592022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain DSM 319).;"
L3_072_000M1_scaffold_2116_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1307..2155
DNA (849bp) protein (283aa)
Alpha/beta hydrolase fold protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BIH1_9CLOT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCX51251.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
alpha/beta hydrolase
L3_072_000M1_scaffold_2116_3
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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2494..4788
DNA (2295bp) protein (765aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TYN6_9FIRM
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein {ECO:0000313|EMBL:CDC74964.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
acetyl xylan esterase
L3_072_000M1_scaffold_2116_4
Prevotella oralis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5062..8265)
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Prevotella oralis CC98A RepID=V8BTY5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETD18574.1}; TaxID=1073367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oralis CC98A.;"
six-hairpin glycosidase
L3_072_000M1_scaffold_2116_5
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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8409..9317
DNA (909bp) protein (303aa)
Transcriptional regulatory protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQX9_SPITD
transcriptional regulatory protein
Transcriptional regulatory protein {ECO:0000313|EMBL:ADN03035.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
L3_072_000M1_scaffold_2116_6
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9312..9842)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GBG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24495.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
hypothetical protein
L3_072_000M1_scaffold_2116_7
unknown

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9971..10147
DNA (177bp) protein (59aa)

This feature has no annotations

L3_072_000M1_scaffold_2116_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10244..10969
DNA (726bp) protein (242aa)
Uncharacterized protein n=3 Tax=Desulfitobacterium hafniense RepID=B8FTA2_DESHD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE83005.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_072_000M1_scaffold_2116_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10962..11648
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KSG4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL03505.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L3_072_000M1_scaffold_2116_10
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11664..13514
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A8F0_DESDJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM00235.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L3_072_000M1_scaffold_2116_11
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13876..16596
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A435_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ22956.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L3_072_000M1_scaffold_2116_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17070..17393
DNA (324bp) protein (108aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJU6_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQF26820.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_072_000M1_scaffold_2116_13
unknown

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17434..17655
DNA (222bp) protein (74aa)
AbrB family transcriptional regulator n=1 Tax=Laceyella sacchari RepID=UPI0003B6A6A0
Displaying 13 items

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