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L3_072_000M1_scaffold_2424

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2424_1
unknown

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2..571
DNA (570bp) protein (190aa)

This feature has no annotations

L3_072_000M1_scaffold_2424_2
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(476..1870)
DNA (1395bp) protein (465aa)
Fe-S oxidoreductase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JFL1_9CLOT
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AEY66705.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_072_000M1_scaffold_2424_3
unknown

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comp(2211..2912)
DNA (702bp) protein (234aa)

This feature has no annotations

L3_072_000M1_scaffold_2424_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3252..3953)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=1 Tax=Clostridium ultunense Esp RepID=M1YS05_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
RNA polymerase sigma 28 subunit SigK
L3_072_000M1_scaffold_2424_5
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4126..4515)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UXK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERL22965.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
hypothetical protein
L3_072_000M1_scaffold_2424_6
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4769..5719
DNA (951bp) protein (317aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=5 Tax=Pelosinus fermentans RepID=I8RK29_9FIRM
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EIW18650.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
metal dependent phosphohydrolase
L3_072_000M1_scaffold_2424_7
unknown

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comp(5720..5815)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_072_000M1_scaffold_2424_8
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5909..7606
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36707.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
oligoendopeptidase
L3_072_000M1_scaffold_2424_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7623..8282
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77098.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_072_000M1_scaffold_2424_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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8718..9512
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23382.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Protein of unknown function (DUF2961).
L3_072_000M1_scaffold_2424_11
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9830..11344)
DNA (1515bp) protein (505aa)
Ferredoxin n=1 Tax=Thermincola potens (strain JR) RepID=D5X8V7_THEPJ
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ADG80957.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
L3_072_000M1_scaffold_2424_12
Prevotella maculosa, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11814..13742
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Prevotella oris RepID=UPI00035C864D
Uncharacterized protein {ECO:0000313|EMBL:EHO66104.1}; TaxID=999422 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella maculosa OT 289.;"
hypothetical protein
L3_072_000M1_scaffold_2424_13
unknown

Not on your lists

13759..14643
DNA (885bp) protein (295aa)

This feature has no annotations

L3_072_000M1_scaffold_2424_14
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14970..16334
DNA (1365bp) protein (455aa)
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Pyridoxal-phosphate dependent TrpB-like enzyme n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQL0_CLOC7
Displaying 14 items

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