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L3_072_000M1_scaffold_1632

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1632_1
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..694)
DNA (693bp) protein (231aa)
purH; Bifunctional purine biosynthesis protein PurH (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6Q1_ETHHY
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_072_000M1_scaffold_1632_2
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(726..1343)
DNA (618bp) protein (206aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZI7_MAHA5
L3_072_000M1_scaffold_1632_3
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1334..2362)
DNA (1029bp) protein (343aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JG46_9CLOT
phosphoribosylaminoimidazole synthetase
L3_072_000M1_scaffold_1632_4
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2417..2911)
DNA (495bp) protein (165aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ33_CELLD
phosphoribosylaminoimidazole carboxylase catalytic subunit
L3_072_000M1_scaffold_1632_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3144..4508)
DNA (1365bp) protein (455aa)
Cell division protein FtsZ n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWY0_CLOA9
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_072_000M1_scaffold_1632_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4522..5703)
DNA (1182bp) protein (394aa)
Cell division protein ftsA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1N7_9CLOT
Cell division protein ftsA {ECO:0000313|EMBL:CCX49460.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cell division protein FtsA
L3_072_000M1_scaffold_1632_7
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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comp(5876..6652)
DNA (777bp) protein (259aa)
Putative Polypeptide-transport-associated domain protein FtsQ-type id=1779242 bin=GWB2_Clostridiales_37_7 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
cell division septal protein-like protein
Tax=GWB2_Clostridiales_37_7_curated
L3_072_000M1_scaffold_1632_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6601..7911)
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1ZBN5_9CLOT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_072_000M1_scaffold_1632_9
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7995..9218)
DNA (1224bp) protein (408aa)
Cell division protein FtsW n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFF8_9FIRM
Stage V sporulation protein E {ECO:0000313|EMBL:EYE88409.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
cell cycle protein
L3_072_000M1_scaffold_1632_10
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9262..10620)
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8M2_9FIRM
UDP-N-acetylmuramoylalanine/D-glutamate ligase
Tax=BJP_08E140C01_Clostridiales_46_19
L3_072_000M1_scaffold_1632_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10746..11744)
DNA (999bp) protein (333aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9N3_9CLOT
L3_072_000M1_scaffold_1632_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(11777..13258)
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3Z0_9FIRM
L3_072_000M1_scaffold_1632_13
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(13334..15286)
DNA (1953bp) protein (651aa)
stage V sporulation protein D (EC:2.4.1.129)
Stage V sporulation protein D {ECO:0000313|EMBL:AEE96784.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEE96784.1};; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Stage V sporulation protein D n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZ25_MAHA5
L3_072_000M1_scaffold_1632_14
unknown

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comp(15288..15878)
DNA (591bp) protein (197aa)

This feature has no annotations

L3_072_000M1_scaffold_1632_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15897..16829)
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXA0_9CLOT
ribosomal RNA small subunit methyltransferase H
L3_072_000M1_scaffold_1632_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16830..17288)
DNA (459bp) protein (153aa)
Protein MraZ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD92_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
mraZ; protein MraZ
L3_072_000M1_scaffold_1632_17
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17668..19200)
DNA (1533bp) protein (511aa)
nahA1; beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase family GH20 n=1 Tax=Clostridium sp. CAG:448 RepID=R6T692_9CLOT
Beta-N-acetylhexosaminidase family GH20 {ECO:0000313|EMBL:CDC63326.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_072_000M1_scaffold_1632_18
unknown

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comp(19197..20471)
DNA (1275bp) protein (425aa)

This feature has no annotations

L3_072_000M1_scaffold_1632_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20611..21501
DNA (891bp) protein (297aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0YZ03_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB93009.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_1632_20
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21539..21793)
DNA (255bp) protein (85aa)
ATPases involved in chromosome partitioning n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LDD4_RUMC1
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL17629.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Displaying 20 items

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