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L3_072_000M1_scaffold_1862

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1862_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(255..1364)
DNA (1110bp) protein (370aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Aldose 1-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T861_PALPW
L3_072_000M1_scaffold_1862_2
unknown

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comp(1499..2473)
DNA (975bp) protein (325aa)

This feature has no annotations

L3_072_000M1_scaffold_1862_3
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2757..3620
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AQW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA53390.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
L3_072_000M1_scaffold_1862_4
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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3645..4817
DNA (1173bp) protein (391aa)
Putative uncharacterized protein id=3182335 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
malic enzyme
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_1862_5
unknown

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5021..5551
DNA (531bp) protein (177aa)

This feature has no annotations

L3_072_000M1_scaffold_1862_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5554..6381)
DNA (828bp) protein (276aa)
Ketose-bisphosphate aldolase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSG5_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EFB74345.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
fructose-bisphosphate aldolase
L3_072_000M1_scaffold_1862_7
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6402..6944)
DNA (543bp) protein (181aa)
D-lyxose ketol-isomerase (EC:5.3.1.15)
D-lyxose ketol-isomerase {ECO:0000313|EMBL:ADL08607.1}; EC=5.3.1.15 {ECO:0000313|EMBL:ADL08607.1};; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
D-lyxose ketol-isomerase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ53_THEOJ
L3_072_000M1_scaffold_1862_8
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6925..7911)
DNA (987bp) protein (329aa)
Fructokinase (EC:2.7.1.4)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MTY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74151.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L3_072_000M1_scaffold_1862_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8112..9275
DNA (1164bp) protein (388aa)
ROK family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMS9_9FIRM
ROK family protein {ECO:0000313|EMBL:EEQ59323.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ROK protein
L3_072_000M1_scaffold_1862_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9308..11530
DNA (2223bp) protein (741aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G832_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE22167.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
chromosome condensation regulator RCC1
L3_072_000M1_scaffold_1862_11
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11714..13030)
DNA (1317bp) protein (439aa)
MATE efflux family protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHV8_CLOPH
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABX43805.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_072_000M1_scaffold_1862_12
unknown

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comp(13288..14193)
DNA (906bp) protein (302aa)

This feature has no annotations

L3_072_000M1_scaffold_1862_13
Firmicutes bacterium CAG:345, Firmicutes, Bacteria

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comp(14285..15292)
DNA (1008bp) protein (336aa)
Alpha/beta hydrolase fold protein n=1 Tax=Firmicutes bacterium CAG:345 RepID=R6Z044_9FIRM
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CDD23877.1}; TaxID=1263020 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:345.;"
hypothetical protein
L3_072_000M1_scaffold_1862_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15451..16098
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS71408.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
L3_072_000M1_scaffold_1862_15
unknown

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16095..16265
DNA (171bp) protein (57aa)

This feature has no annotations

L3_072_000M1_scaffold_1862_16
unknown

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16262..16777
DNA (516bp) protein (172aa)

This feature has no annotations

L3_072_000M1_scaffold_1862_17
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16872..17546
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIF5_9FIRM
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:CEG25053.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
hypothetical protein
L3_072_000M1_scaffold_1862_18
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17593..18612
DNA (1020bp) protein (340aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
2-dehydropantoate 2-reductase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DVC7_9FIRM
2-dehydropantoate 2-reductase
L3_072_000M1_scaffold_1862_19
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18638..18922
DNA (285bp) protein (95aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0H3_CLOBA
antibiotic biosynthesis monooxygenase
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CCG56279.1}; TaxID=1161918 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli WesB.;"
L3_072_000M1_scaffold_1862_20
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18937..19530
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D5W6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79551.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
galactoside O-acetyltransferase
Displaying 20 items

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