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L3_072_000M1_scaffold_2135_6

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 5410..7080

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium sp. CAG:448 RepID=R6T3A4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 559.0
  • Bit_score: 562
  • Evalue 3.60e-157
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDC62246.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 559.0
  • Bit_score: 562
  • Evalue 5.00e-157
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 359.0
  • Bit_score: 136
  • Evalue 1.40e-29

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Taxonomy

Clostridium sp. CAG:448 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1671
ATGGACAGACAGGAGGCCGAACGGCTGATCGAGCAATATGCAAAGCCTCTCTTAGGGTTTGCCTTAAAGCGCTGCGCGTGCATTCAGGATGCTGAGGATCTTGCGCAGGAGATTATGCTTAGAACATTTCGCGCTCTTTTACAGCATGAAGAGATGAAAGACGCCGGAAAGTTTATCTGGACGGCGGCGCATCACGCGCTTGCAAATTACTACCGCGGGGCGAAGGGCAGGCATATCGGGGCTGCGCCGGAGGAGATCGAGCGGCTTGCCGATGACGGGCGCGATATCGTCTCGGAGCTGGCTGTGCGGGAGGCGGAGCATCGGCTGCGGCAAGAGATCGCTTATCTCTCCGAGCTGCAGCGCAGGATCGTGATTGCTTATTATTTTGAAAATAAAAAGCAAAGCGCGATTGCCGAAGAGCTTGGCATTCCCGGCGGCACGGTCAAATGGCATCTGTTTGAAGCGAAAAAAGAGCTGAAAAGGGGAATGGAAAAAATGAGAGAGACCAGTGAGCTGAAATTCAATCCGATTCGTTTTTCCGTGTGCGGAATAAACGGATCTCCGGGGACAAAGGGCGGGCCGGATGCGTTTTTTCGCAGTGTATTATCACAGAATATCGAATATTCTGTGTGGAAAAGGGCTAAAACGACCAATGAAATCGCTGACGACTTAGGCGTGTCGCCCGTTTATGTGGAGAACGAGGCGGAATATCTTGCCGAATATGGGTTCCTTGTAAAAGACGGAGAGAAATATCTGTGCAATATTCTTTTGGAGGAACCGACGCAGGAGCTTATCCGCCTGCACGATGAGATGTACGAGAAAGCAGCTGCCATATTCGCTCCGACTCTTTATGACGAGCTGAGCCAAAGCTCGCTGCTTGATGATGAATCAAGGGTGGTATGTAATCGAATGGCGGGAGTTCAAAACGGAAAGCCCGTTTGGGAAAGAGATAAAAACTTTATGCTTTGGGCGTTGATTCCATACGTTGCCGCATGCAGCGGCGAAGAGCTTATGGAGAATAAAATCTCTTTTGAAAAGGCGGCGACGCTTCGGCCTGACGGCGGGCAGAATATTTGCTATGCGTCAGTTCCTGCGCCGGACGCTGCACAGCCTCGGTATGCCGAAAGCATGAGCCAATGGTTTGGCCCTTCGTGGACGGCCTATCAAGATCTTATGCTGTGGCAGGTGGATTCGGAATGGTCGCTTCGGAATCGGGAGAACCGTTTCAGCGACAGAATGGATCGCGCGCTCGCACTGCTGCGGCGCCATTTGCGGGGAGAAGCGCTTTTAGCCGAGGAATATGCTTTTCTTGCAGAAGAAGGGTATATGAGAAGCTGCGGTGAGCCGGAAGAAGAATTTTATGCGGCGCTTCAGGTCGTATGGGTCAGGAGCGAGGAGGCAAAGCGCAGGCTGCTTGAGATTGGAAACCGGGTTAAGGCGGCCTGCAATCAAAAGCTCAGCGCATTAAAGGTGCCTTATGTTGAGGCGGTCATGGCATCTACGCCGAAACATCTGCAAAAAATGCAGGCGTTTGGGCTGCAATATATCTTTTATTCCGACGGTTGGTTTTTGCTGCATTGCCTGAAAGCGTTGGTAAAGGACGGAGGATTGAGACTGCCGAAAGAGGAACAGAGAAAATCATTGAGCGCGGTTCTTTTGCAGAAGCAGTAA
PROTEIN sequence
Length: 557
MDRQEAERLIEQYAKPLLGFALKRCACIQDAEDLAQEIMLRTFRALLQHEEMKDAGKFIWTAAHHALANYYRGAKGRHIGAAPEEIERLADDGRDIVSELAVREAEHRLRQEIAYLSELQRRIVIAYYFENKKQSAIAEELGIPGGTVKWHLFEAKKELKRGMEKMRETSELKFNPIRFSVCGINGSPGTKGGPDAFFRSVLSQNIEYSVWKRAKTTNEIADDLGVSPVYVENEAEYLAEYGFLVKDGEKYLCNILLEEPTQELIRLHDEMYEKAAAIFAPTLYDELSQSSLLDDESRVVCNRMAGVQNGKPVWERDKNFMLWALIPYVAACSGEELMENKISFEKAATLRPDGGQNICYASVPAPDAAQPRYAESMSQWFGPSWTAYQDLMLWQVDSEWSLRNRENRFSDRMDRALALLRRHLRGEALLAEEYAFLAEEGYMRSCGEPEEEFYAALQVVWVRSEEAKRRLLEIGNRVKAACNQKLSALKVPYVEAVMASTPKHLQKMQAFGLQYIFYSDGWFLLHCLKALVKDGGLRLPKEEQRKSLSAVLLQKQ*