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L3_072_000M1_scaffold_2215_8

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 5459..6169

Top 3 Functional Annotations

Value Algorithm Source
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22) similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 234.0
  • Bit_score: 254
  • Evalue 1.90e-65
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 234.0
  • Bit_score: 254
  • Evalue 9.50e-65
Pseudouridine synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJW8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 234.0
  • Bit_score: 254
  • Evalue 6.70e-65

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Taxonomy

Clostridium saccharoperbutylacetonicum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
ATGGAACGGCTACAAAAATTTATGGCAGCTTGCGGCGTTGCTTCAAGAAGAAAATGTGAAGAGATTATAAAAGAGGGGCGTGTTTCGGTTAACGGGATTCCCGTGCTTGAAATGGGGATACAAATTGATCCGGAAAAAGACTGCGTAACAGTGGATGGAACAAATATCAGAAAGCCTGAAAAAAAGATTGTAATTATGCTGAACAAGCCTGATTATGTCATGAGTACGGCGCATGATCCCGAGGGACGTGATACCGTTGTGCAGTTAGTGCCTTCCGAACAGCGGCTTTTTCCCGTAGGGCGATTGGATTACCATACGGAAGGACTTATTCTGCTTACAAACGACGGTGAAATCGCATATCGGCTGACTCATCCTAAATACGAGATCGAAAAAGAATATGTTGCAGTGATTAAAGGGCGTCTTGAAAGGCGAGAACTTCTTAAGCTTCAAAGCGGTGTAGAGATAGACGGTGAGCTTACGGCTCCGGCTAAAGTTAAAATTGTAGGTCAAACGGAGCATACAACATCCGTCAGCATGATTATTCATGAAGGCCGTAATCGCCAAATCCGAAAGATGTTGGAAGCTGTGGAAAAAGAAGTGCTGCAGCTAACGCGCATCCGTATGGGAGAGCTGTTTCTCGGCAAACTAAAACCGGGTGAATATCGCTTGCTGAACGGTTCCGAAATGGGCTTTCTTAATCAGCTTCGCTGA
PROTEIN sequence
Length: 237
MERLQKFMAACGVASRRKCEEIIKEGRVSVNGIPVLEMGIQIDPEKDCVTVDGTNIRKPEKKIVIMLNKPDYVMSTAHDPEGRDTVVQLVPSEQRLFPVGRLDYHTEGLILLTNDGEIAYRLTHPKYEIEKEYVAVIKGRLERRELLKLQSGVEIDGELTAPAKVKIVGQTEHTTSVSMIIHEGRNRQIRKMLEAVEKEVLQLTRIRMGELFLGKLKPGEYRLLNGSEMGFLNQLR*