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L3_072_000M1_scaffold_2148

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2148_1
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(254..2857)
DNA (2604bp) protein (868aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RJQ1_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDC47960.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Methyl-accepting chemotaxis protein
L3_072_000M1_scaffold_2148_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3030..4292)
DNA (1263bp) protein (421aa)
Chloride channel protein EriC n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKV7_9FIRM
Chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:CBL34390.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_2148_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4295..5260)
DNA (966bp) protein (322aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKV8_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_2148_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5390..6214)
DNA (825bp) protein (275aa)
Nucleotide-binding protein n=3 Tax=root RepID=B0MK04_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDC47955.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ATPases involved in chromosome partitioning
L3_072_000M1_scaffold_2148_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6556..7005)
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6RH82_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48228.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_2148_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7059..7625)
DNA (567bp) protein (189aa)
Elongation factor P n=4 Tax=Eubacterium RepID=D4JSD1_9FIRM
translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_072_000M1_scaffold_2148_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8092..8919
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKW1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34394.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_2148_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9162..10019)
DNA (858bp) protein (286aa)
Galactose mutarotase and related enzymes n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKW2_9FIRM
Galactose mutarotase and related enzymes
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CBL34395.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_2148_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10035..11405)
DNA (1371bp) protein (457aa)
Beta-mannanase (EC:3.2.1.78)
Glycosyl hydrolase family 26 n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJZ3_9FIRM
Glycosyl hydrolase family 26 {ECO:0000313|EMBL:EDS01987.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_072_000M1_scaffold_2148_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11563..12390)
DNA (828bp) protein (276aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJZ2_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS01986.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
AraC-type DNA-binding domain-containing proteins
L3_072_000M1_scaffold_2148_11
unknown

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comp(12711..13094)
DNA (384bp) protein (128aa)

This feature has no annotations

L3_072_000M1_scaffold_2148_12
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13544..13981)
DNA (438bp) protein (146aa)
Predicted membrane protein n=4 Tax=Eubacterium RepID=D4JSD7_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CDC48240.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_2148_13
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14106..15275
DNA (1170bp) protein (390aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SNQ4_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDC48242.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_2148_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15732..17069
DNA (1338bp) protein (446aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glucose-6-phosphate isomerase n=5 Tax=root RepID=D4JSE2_9FIRM
L3_072_000M1_scaffold_2148_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17182..17589
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=root RepID=B0MK02_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48246.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_2148_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17696..17881
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=2 Tax=Eubacterium RepID=B0MK01_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
50S ribosomal protein L32
L3_072_000M1_scaffold_2148_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18523..19839
DNA (1317bp) protein (439aa)
Fe-S oxidoreductase n=1 Tax=Eubacterium siraeum RepID=UPI00031FAB58
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EDS01976.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_072_000M1_scaffold_2148_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19836..21005
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01975.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_072_000M1_scaffold_2148_19
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21023..22342
DNA (1320bp) protein (440aa)
GTPase Der n=4 Tax=root RepID=D4JSE6_9FIRM
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_2148_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22349..23005
DNA (657bp) protein (219aa)
Glycerol-3-phosphate acyltransferase n=4 Tax=Eubacterium RepID=D4JSE7_9FIRM
conserved hypothetical integral membrane protein TIGR00023
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_072_000M1_scaffold_2148_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23024..24016
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RYU8_9FIRM
Displaying 21 items

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