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L3_072_000M1_scaffold_2767

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2767_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34..129)
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNA6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35239.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_2767_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(322..771)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=3 Tax=Eubacterium RepID=D4JXA8_9FIRM
Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_072_000M1_scaffold_2767_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(876..1673)
DNA (798bp) protein (266aa)
Sugar phosphate isomerases/epimerases n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNA8_9FIRM
Sugar phosphate isomerases/epimerases
Sugar phosphate isomerases/epimerases {ECO:0000313|EMBL:CBL35241.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_2767_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1697..4432)
DNA (2736bp) protein (912aa)
Bacterial membrane protein YfhO n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RGI0_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CDC46925.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
yfhO; Bacterial membrane protein, YfhO family
L3_072_000M1_scaffold_2767_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4562..5575)
DNA (1014bp) protein (338aa)
Protein-export membrane protein SecF n=2 Tax=root RepID=B0MK56_9FIRM
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_072_000M1_scaffold_2767_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5572..7068)
DNA (1497bp) protein (499aa)
Protein translocase subunit SecD n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RDG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46928.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
secD; Protein-export membrane protein SecD
L3_072_000M1_scaffold_2767_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7163..8602)
DNA (1440bp) protein (480aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MK58_9FIRM
L3_072_000M1_scaffold_2767_8
unknown

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8643..9182
DNA (540bp) protein (180aa)

This feature has no annotations

L3_072_000M1_scaffold_2767_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9412..10332)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01694.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
L3_072_000M1_scaffold_2767_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11761..13359
DNA (1599bp) protein (533aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Ribonuclease Y n=3 Tax=Eubacterium RepID=D4MNB2_9FIRM
conserved hypothetical protein YmdA/YtgF
L3_072_000M1_scaffold_2767_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13427..14698
DNA (1272bp) protein (424aa)
Putative endoglucanase A n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKL3_9FIRM
Putative endoglucanase A {ECO:0000313|EMBL:EDS01697.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Endoglucanase
Displaying 11 items

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