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L3_072_000M1_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_479_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(222..761)
DNA (540bp) protein (180aa)
Cell wall teichoic acid glycosylation protein GtcA n=2 Tax=Eubacterium RepID=B0MLK8_9FIRM
Cell wall teichoic acid glycosylation protein GtcA {ECO:0000313|EMBL:EDS01352.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
GtrA family protein
L3_072_000M1_scaffold_479_2
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(762..1211)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RWT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47486.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Bacterial membrane flanked domain.
L3_072_000M1_scaffold_479_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1230..1442)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI96_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33479.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_479_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1472..2995)
DNA (1524bp) protein (508aa)
asd; Alpha-N-arabinofuranosidase (Glycoside Hydrolase Family 51 protein ) (EC:3.2.1.55)
Alpha-L-arabinofuranosidase domain protein n=3 Tax=root RepID=B0MLL1_9FIRM
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EDS01355.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_072_000M1_scaffold_479_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3145..3795
DNA (651bp) protein (217aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CBL33478.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBL33478.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI95_9FIRM
L3_072_000M1_scaffold_479_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3814..4326
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=5 Tax=root RepID=D4JR19_9FIRM
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_479_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4338..5378
DNA (1041bp) protein (347aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI93_9FIRM
tRNA (guanine-N1)-methyltransferase
L3_072_000M1_scaffold_479_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5513..5962)
DNA (450bp) protein (150aa)
Acetyltransferase (GNAT) family. (EC:2.3.1.-)
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CBL33475.1}; EC=2.3.1.- {ECO:0000313|EMBL:CBL33475.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Acetyltransferase (GNAT) family n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI92_9FIRM
L3_072_000M1_scaffold_479_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6033..7214)
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=3 Tax=Eubacterium RepID=B0MLL6_9FIRM
L3_072_000M1_scaffold_479_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7689..8390
DNA (702bp) protein (234aa)
ABC-type antimicrobial peptide transport system, ATPase component n=5 Tax=root RepID=D4JVQ6_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDC47504.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_479_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8410..11844
DNA (3435bp) protein (1145aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI89_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CBL33472.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_479_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11877..15119
DNA (3243bp) protein (1081aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI88_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33471.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_479_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15320..15832
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01364.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_072_000M1_scaffold_479_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15888..16664)
DNA (777bp) protein (259aa)
Predicted permeases n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RFC3_9FIRM
Predicted permeases {ECO:0000313|EMBL:CDC47588.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Predicted permeases
L3_072_000M1_scaffold_479_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16664..17101)
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLM2_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS01366.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Transcriptional regulators
L3_072_000M1_scaffold_479_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17376..19268
DNA (1893bp) protein (631aa)
Chaperone protein HtpG n=3 Tax=Eubacterium RepID=D4MI84_9FIRM
Molecular chaperone, HSP90 family
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_072_000M1_scaffold_479_17
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19353..20150)
DNA (798bp) protein (266aa)
Beta-mannanase (EC:3.2.1.78)
Beta-mannanase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RIK8_9FIRM
Beta-mannanase {ECO:0000313|EMBL:CDC47595.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_479_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20394..21194)
DNA (801bp) protein (267aa)
Beta-mannanase (EC:3.2.1.78)
Beta-mannanase {ECO:0000313|EMBL:CBL33466.1}; EC=3.2.1.78 {ECO:0000313|EMBL:CBL33466.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Beta-mannanase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI83_9FIRM
L3_072_000M1_scaffold_479_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21479..23731
DNA (2253bp) protein (751aa)
BNR/Asp-box repeat n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI82_9FIRM
BNR/Asp-box repeat {ECO:0000313|EMBL:CBL33465.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
BNR/Asp-box repeat.
L3_072_000M1_scaffold_479_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23795..24091)
DNA (297bp) protein (99aa)
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Polyphosphate kinase n=2 Tax=root RepID=D4MI81_9FIRM
L3_072_000M1_scaffold_479_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24039..25820)
DNA (1782bp) protein (594aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RIL2_9FIRM
L3_072_000M1_scaffold_479_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25932..27545)
DNA (1614bp) protein (538aa)
CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
CTP synthase n=5 Tax=root RepID=D4JVP5_9FIRM
L3_072_000M1_scaffold_479_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27900..28880
DNA (981bp) protein (327aa)
Membrane-fusion protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVP4_9FIRM
Membrane-fusion protein
Membrane-fusion protein {ECO:0000313|EMBL:CBK97163.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_072_000M1_scaffold_479_24
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28950..31694
DNA (2745bp) protein (915aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RFE1_9FIRM
Predicted permease.
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC47608.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_479_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31719..31961
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Eubacterium siraeum RepID=UPI0003008672
Uncharacterized protein {ECO:0000313|EMBL:EDS01376.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_072_000M1_scaffold_479_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31961..32686
DNA (726bp) protein (242aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVP2_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CBK97161.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_072_000M1_scaffold_479_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32707..34104
DNA (1398bp) protein (466aa)
poly(A) polymerase (EC:2.7.7.19)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RX62_9FIRM
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:CDC47616.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_072_000M1_scaffold_479_28
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34135..34770
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RQL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47619.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_072_000M1_scaffold_479_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34767..35597
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI75_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33458.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_479_30
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35635..37053)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SM20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47622.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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