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L3_072_000M1_scaffold_1566

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1566_1
unknown

Not on your lists

comp(24..311)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_1566_2
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(335..1402)
DNA (1068bp) protein (356aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BU08_9FIRM
L3_072_000M1_scaffold_1566_3
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(1587..2666)
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUW5_9FIRM
L3_072_000M1_scaffold_1566_4
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(2715..3389)
DNA (675bp) protein (225aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BW56_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD69253.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_072_000M1_scaffold_1566_5
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(3461..4426)
DNA (966bp) protein (322aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTX0_9FIRM
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDD69254.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
iron-sulfur cluster-binding protein
L3_072_000M1_scaffold_1566_6
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(4445..6013)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD69255.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_072_000M1_scaffold_1566_7
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(6262..6732)
DNA (471bp) protein (157aa)
50S ribosomal protein L17 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BU13_9FIRM
50S ribosomal protein L17 {ECO:0000313|EMBL:CDD69256.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
50S ribosomal protein L17
L3_072_000M1_scaffold_1566_8
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(6784..7740)
DNA (957bp) protein (319aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUW9_9FIRM
L3_072_000M1_scaffold_1566_9
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(7761..8384)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BW59_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
30S ribosomal protein S4
L3_072_000M1_scaffold_1566_10
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(8402..8797)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTX1_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
30S ribosomal protein S11
L3_072_000M1_scaffold_1566_11
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(8810..9178)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTZ9_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
ribosomal protein S13
L3_072_000M1_scaffold_1566_12
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(9514..9732)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUX3_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
infA; translation initiation factor IF-1
L3_072_000M1_scaffold_1566_13
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(9742..10008)
DNA (267bp) protein (89aa)
LSU ribosomal protein L14E n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BW63_9FIRM
LSU ribosomal protein L14E {ECO:0000313|EMBL:CDD69263.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
50S ribosomal protein L14E
L3_072_000M1_scaffold_1566_14
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10010..10747)
DNA (738bp) protein (246aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
Methionine aminopeptidase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FMH9_9FIRM
Methionine aminopeptidase (MAP)
L3_072_000M1_scaffold_1566_15
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(10744..11364)
DNA (621bp) protein (207aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BS95_9FIRM
L3_072_000M1_scaffold_1566_16
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(11462..12787)
DNA (1326bp) protein (442aa)
Protein translocase subunit SecY n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTG1_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
protein translocase subunit secY/sec61 alpha
L3_072_000M1_scaffold_1566_17
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(12787..13233)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRD1_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rplO; 50S ribosomal protein L15
L3_072_000M1_scaffold_1566_18
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(13244..13453)
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRF9_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
ribosomal protein L30
L3_072_000M1_scaffold_1566_19
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(13468..13986)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRC0_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
30S ribosomal protein S5
L3_072_000M1_scaffold_1566_20
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(13998..14366)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BS98_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rplR; 50S ribosomal protein L18
L3_072_000M1_scaffold_1566_21
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(14379..14918)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTG6_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rplF; ribosomal protein L6
L3_072_000M1_scaffold_1566_22
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(14930..15304)
DNA (375bp) protein (125aa)
30S ribosomal protein S8 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRD6_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Ribosomal protein S8
L3_072_000M1_scaffold_1566_23
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(15537..16145)
DNA (609bp) protein (203aa)
50S ribosomal protein L5 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRC5_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
50S ribosomal protein L5
L3_072_000M1_scaffold_1566_24
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(16164..16571)
DNA (408bp) protein (136aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSA3_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
LSU ribosomal protein L24P
L3_072_000M1_scaffold_1566_25
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(16586..16954)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTG9_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rplN; 50S ribosomal protein L14
L3_072_000M1_scaffold_1566_26
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(16968..17225)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRE1_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
30S ribosomal protein S17
L3_072_000M1_scaffold_1566_27
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(17238..17429)
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRG8_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
50S ribosomal protein L29
L3_072_000M1_scaffold_1566_28
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(17450..17887)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRD0_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rplP; 50S ribosomal protein L16
L3_072_000M1_scaffold_1566_29
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(17887..18549)
DNA (663bp) protein (221aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSA8_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rpsC; ribosomal protein S3 (BS3)
L3_072_000M1_scaffold_1566_30
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists


comp(18565..18954)
DNA (390bp) protein (130aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTH4_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
50S ribosomal protein L22
Displaying items 1-30 of 36 in total

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