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L3_072_000M1_scaffold_673

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_673_1
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..694
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FPL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE16770.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
hypothetical protein
L3_072_000M1_scaffold_673_2
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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comp(783..2153)
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSD3_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
chromosomal replication initiator protein DnaA
L3_072_000M1_scaffold_673_3
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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2261..3349
DNA (1089bp) protein (363aa)
DNA replication and repair protein RecF n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BT82_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
recF protein
L3_072_000M1_scaffold_673_4
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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comp(3430..4329)
DNA (900bp) protein (300aa)
Chromosome partitioning protein SpoOJ n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSD9_9FIRM
Chromosome partitioning protein SpoOJ {ECO:0000313|EMBL:CDD68721.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
ParB-like partition protein
L3_072_000M1_scaffold_673_5
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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comp(4333..5088)
DNA (756bp) protein (252aa)
Chromosome partitioning protein membrane-associated ATPase n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BT89_9FIRM
Chromosome partitioning protein membrane-associated ATPase {ECO:0000313|EMBL:CDD68722.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
parA; chromosome partitioning protein ParA
L3_072_000M1_scaffold_673_6
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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comp(5201..5917)
DNA (717bp) protein (239aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUH0_9FIRM
gidB; 16S rRNA methyltransferase GidB
L3_072_000M1_scaffold_673_7
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

6055..6780
DNA (726bp) protein (242aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Phosphorylase family protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSD5_9FIRM
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
L3_072_000M1_scaffold_673_8
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(9404..10102)
DNA (699bp) protein (233aa)
Hemolysin III family channel protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSG7_9FIRM
Hemolysin III family channel protein {ECO:0000313|EMBL:CDD68725.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hemolysin III family channel protein
L3_072_000M1_scaffold_673_9
unknown

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10227..10439
DNA (213bp) protein (71aa)

This feature has no annotations

L3_072_000M1_scaffold_673_10
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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10532..12442
DNA (1911bp) protein (637aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSE3_9FIRM
L3_072_000M1_scaffold_673_11
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12453..15044
DNA (2592bp) protein (864aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
DNA gyrase subunit A n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K8Y6_9FIRM
DNA gyrase subunit A
L3_072_000M1_scaffold_673_12
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

15103..16800
DNA (1698bp) protein (566aa)
treC; alpha-alpha-phosphotrehalase (EC:3.2.1.93)
Alpha-alpha-phosphotrehalase TreC n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTP0_9FIRM
Alpha-alpha-phosphotrehalase TreC {ECO:0000313|EMBL:CDD68877.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_13
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(16865..17380)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68876.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_072_000M1_scaffold_673_14
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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17526..18104
DNA (579bp) protein (193aa)
Putative flavoredoxin n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSX9_9FIRM
Putative flavoredoxin {ECO:0000313|EMBL:CDD68875.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
conserved protein of DIM6/NTAB family
L3_072_000M1_scaffold_673_15
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

18104..18388
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68874.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_16
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

18546..19067
DNA (522bp) protein (174aa)
Putative stage V sporulation protein T n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUW2_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:CDD68873.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
regulator of stationary/sporulation gene expression
L3_072_000M1_scaffold_673_17
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

19064..20674
DNA (1611bp) protein (537aa)
Polysaccharide biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTN6_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD68872.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Polysaccharide biosynthesis protein
L3_072_000M1_scaffold_673_18
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

20661..21713
DNA (1053bp) protein (351aa)
MazG family protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSU5_9FIRM
MazG family protein {ECO:0000313|EMBL:CDD68871.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
MazG family protein
L3_072_000M1_scaffold_673_19
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

21771..22706
DNA (936bp) protein (312aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
dusA2; tRNA dihydrouridine synthase A DusA2 (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSX4_9FIRM
L3_072_000M1_scaffold_673_20
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

22844..23365
DNA (522bp) protein (174aa)
RNA polymerase sigma factor sigK n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSR1_9FIRM
RNA polymerase sigma factor sigK {ECO:0000313|EMBL:CDD68869.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_21
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

23431..24603
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68868.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_22
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

24620..25528
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68867.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_23
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

25785..26987
DNA (1203bp) protein (401aa)
HI0933 family protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSU0_9FIRM
HI0933 family protein {ECO:0000313|EMBL:CDD68866.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_072_000M1_scaffold_673_24
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

27037..27549
DNA (513bp) protein (171aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
ppiD; Peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSW9_9FIRM
L3_072_000M1_scaffold_673_25
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

27685..29046
DNA (1362bp) protein (454aa)
Lysophospholipase L1 and related esterases n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSQ8_9FIRM
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CDD68864.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_26
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

29063..29848
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68863.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_673_27
unknown

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comp(30321..30542)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_072_000M1_scaffold_673_28
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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30928..31260
DNA (333bp) protein (111aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTJ4_9FIRM
L3_072_000M1_scaffold_673_29
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

31257..31502
DNA (246bp) protein (82aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BVP4_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
conserved hypothetical protein TIGR00278
L3_072_000M1_scaffold_673_30
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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31490..32734
DNA (1245bp) protein (415aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUG8_9FIRM
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDD69147.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
YidC/Oxa1 family membrane protein insertase
Displaying items 1-30 of 58 in total

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