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L3_072_000M1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_11_1
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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294..2141
DNA (1848bp) protein (616aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FC6CEF
L3_072_000M1_scaffold_11_2
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2179..4410
DNA (2232bp) protein (744aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FJ53_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB12105.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
L3_072_000M1_scaffold_11_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4415..5002
DNA (588bp) protein (196aa)
Probable GTP-binding protein EngB n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UC33_9BACT
ribosome biogenesis GTP-binding protein YsxC/EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_072_000M1_scaffold_11_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5280..6221
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUT9_9BACT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDD25435.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ribose-phosphate pyrophosphokinase
L3_072_000M1_scaffold_11_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6358..7623)
DNA (1266bp) protein (422aa)
Transglutaminase-like protein n=2 Tax=Parabacteroides RepID=E1YYR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28801.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_072_000M1_scaffold_11_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7657..8475)
DNA (819bp) protein (273aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JH21_9BACT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE63219.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Short-chain alcohol dehydrogenase of unknown specificity
L3_072_000M1_scaffold_11_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8490..9266)
DNA (777bp) protein (259aa)
beta-lactamase n=1 Tax=Alistipes senegalensis RepID=UPI00036E5167
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:CCZ96180.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_072_000M1_scaffold_11_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9651..10808)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003131005
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
L3_072_000M1_scaffold_11_9
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10809..11690)
DNA (882bp) protein (294aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Alistipes sp. CAG:268 RepID=R6VW09_9BACT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
bacterial peptide chain release factor 2 (bRF-2)
L3_072_000M1_scaffold_11_10
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11927..12463)
DNA (537bp) protein (179aa)
RNA methyltransferase TrmH family n=1 Tax=Alistipes sp. CAG:268 RepID=R6VZP0_9BACT
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDC97446.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
rRNA methylase
L3_072_000M1_scaffold_11_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12553..13626
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030A6FCF
Uncharacterized protein {ECO:0000313|EMBL:EFR57421.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_072_000M1_scaffold_11_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13655..15334
DNA (1680bp) protein (560aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
glutaminyl-tRNA synthetase n=1 Tax=Alistipes onderdonkii RepID=UPI0003778B9B
L3_072_000M1_scaffold_11_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15424..17031)
DNA (1608bp) protein (536aa)
Ser/Thr phosphatase family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y530_9BACT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD26454.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phosphohydrolase
L3_072_000M1_scaffold_11_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17124..18086
DNA (963bp) protein (321aa)
GSCFA family protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035C88B1
GSCFA family protein
GSCFA family protein {ECO:0000313|EMBL:AFL78771.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_11_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18120..19718
DNA (1599bp) protein (533aa)
antitoxin n=1 Tax=Alistipes onderdonkii RepID=UPI000361B139
AP superfamily protein
Putative AP superfamily protein {ECO:0000313|EMBL:AFL78770.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_11_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19731..20150
DNA (420bp) protein (140aa)
Fe-S metabolism protein SufE n=1 Tax=Alistipes senegalensis RepID=UPI0002D3D75C
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:CDD25106.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Cysteine desulfuration protein SufE
L3_072_000M1_scaffold_11_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20154..20474
DNA (321bp) protein (107aa)
FeS assembly SUF system protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D4DE84
metal-sulfur cluster biosynthetic enzyme
Putative FeS assembly SUF system protein {ECO:0000313|EMBL:CDD25105.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_072_000M1_scaffold_11_18
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20482..21447
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000315DBE0
Uncharacterized protein {ECO:0000313|EMBL:CDC95873.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Protein of unknown function (DUF2851).
L3_072_000M1_scaffold_11_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21643..24936
DNA (3294bp) protein (1098aa)
Protein translocase subunit SecA n=3 Tax=root RepID=B0MWH5_9BACT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Preprotein translocase subunit SecA
L3_072_000M1_scaffold_11_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24947..25378
DNA (432bp) protein (144aa)
CMP deaminase n=1 Tax=Alistipes onderdonkii RepID=UPI00036EFAAD
deoxycytidylate deaminase
Deoxycytidylate deaminase {ECO:0000313|EMBL:AFL78763.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_11_21
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25416..26414
DNA (999bp) protein (333aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DJW9_9BACE
Malate dehydrogenase {ECO:0000313|EMBL:CDA84576.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
L3_072_000M1_scaffold_11_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26638..27810
DNA (1173bp) protein (391aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Alistipes sp. JC136 RepID=UPI000287A5E4
Aspartate aminotransferase {ECO:0000313|EMBL:CDD25068.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_072_000M1_scaffold_11_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27827..28843
DNA (1017bp) protein (339aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JQB8_9BACT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CDE65816.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
capsule biosynthesis protein CapI
L3_072_000M1_scaffold_11_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28848..29939
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003719D90
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63098.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_11_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30039..30545)
DNA (507bp) protein (169aa)
single-stranded DNA-binding protein n=1 Tax=Alistipes senegalensis RepID=UPI0002E38DDE
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
single stranded DNA-binding protein
L3_072_000M1_scaffold_11_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30549..31352)
DNA (804bp) protein (268aa)
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Purine nucleoside phosphorylase n=2 Tax=Alistipes RepID=D4INA6_9BACT
L3_072_000M1_scaffold_11_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31327..32391)
DNA (1065bp) protein (355aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
lipid-A-disaccharide kinase (EC:2.7.1.130)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E8529E
L3_072_000M1_scaffold_11_28
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32727..33983
DNA (1257bp) protein (419aa)
metalloendopeptidase n=1 Tax=Alistipes onderdonkii RepID=UPI00036C046E
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL78758.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_11_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33980..34393
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003637F0D
Uncharacterized protein {ECO:0000313|EMBL:CDD25008.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_072_000M1_scaffold_11_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34381..35085
DNA (705bp) protein (235aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Alistipes RepID=E4MDF4_9BACT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Displaying items 1-30 of 177 in total

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