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L3_072_000M1_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_73_1
Bacteroides sp. CAG:1060, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1721)
DNA (1719bp) protein (573aa)
Conserved domain protein n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BPY7_9BACE
Conserved domain protein {ECO:0000313|EMBL:CCX57523.1}; TaxID=1262734 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1060.;"
L3_072_000M1_scaffold_73_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2382..3419
DNA (1038bp) protein (346aa)
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:CBK63290.1};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Phosphoserine aminotransferase n=2 Tax=Alistipes RepID=D4IK28_9BACT
L3_072_000M1_scaffold_73_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3423..4421
DNA (999bp) protein (333aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CBK63289.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CBK63289.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
3-phosphoglycerate dehydrogenase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E733FB
L3_072_000M1_scaffold_73_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4451..5716
DNA (1266bp) protein (422aa)
SpoOJ/ParA/ParB/repB family protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D3723D
Uncharacterized protein {ECO:0000313|EMBL:CDD24600.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_072_000M1_scaffold_73_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5723..7090
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003114A56
Uncharacterized protein {ECO:0000313|EMBL:EFR58927.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_072_000M1_scaffold_73_6
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7213..8517
DNA (1305bp) protein (435aa)
glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F6BBF9
Uncharacterized protein {ECO:0000313|EMBL:CDD19491.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
L3_072_000M1_scaffold_73_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8779..9408
DNA (630bp) protein (210aa)
HAD hydrolase, family IA n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HEB2_BACT4
HAD hydrolase, family IA {ECO:0000313|EMBL:EOS02116.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
haloacid dehalogenase
L3_072_000M1_scaffold_73_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9495..10379
DNA (885bp) protein (295aa)
TIGR00255 family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MD08_9BACT
TIGR00255 family protein {ECO:0000313|EMBL:EFR57159.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_072_000M1_scaffold_73_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10395..10964
DNA (570bp) protein (190aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y012_9BACT
L3_072_000M1_scaffold_73_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10961..11761
DNA (801bp) protein (267aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CBK63293.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
nicotinate/nicotinamide nucleotide adenylyltransferase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002884C26
L3_072_000M1_scaffold_73_11
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11767..12753
DNA (987bp) protein (329aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
D-alanine--D-alanine ligase n=1 Tax=Alistipes sp. CAG:268 RepID=R6VFR2_9BACT
ATP-grasp enzyme, D-alanine-D-alanine ligase
L3_072_000M1_scaffold_73_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12757..13338
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YR90_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79508.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_73_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13325..14356
DNA (1032bp) protein (344aa)
metalloendopeptidase n=1 Tax=Alistipes sp. JC136 RepID=UPI00028818C9
Membrane proteins related to metalloendopeptidases
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CBK63295.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_73_14
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14484..15140)
DNA (657bp) protein (219aa)
Putative enzyme with a TIM-barrel fold n=2 Tax=root RepID=R6WT05_9BACT
Putative enzyme with a TIM-barrel fold {ECO:0000313|EMBL:CDC97212.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L3_072_000M1_scaffold_73_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15289..16929
DNA (1641bp) protein (547aa)
peptidase C69 n=1 Tax=Alistipes sp. JC136 RepID=UPI00028937D2
Dipeptidase {ECO:0000313|EMBL:CCZ96878.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Dipeptidase
L3_072_000M1_scaffold_73_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16940..18313
DNA (1374bp) protein (458aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIM2_9BACT
L3_072_000M1_scaffold_73_17
unknown

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comp(18386..18568)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_072_000M1_scaffold_73_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18575..19348)
DNA (774bp) protein (258aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
tRNA pseudouridine synthase A n=2 Tax=Alistipes RepID=I3YRA3_ALIFI
pseudouridylate synthase I
L3_072_000M1_scaffold_73_19
unknown

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comp(19400..19924)
DNA (525bp) protein (175aa)

This feature has no annotations

L3_072_000M1_scaffold_73_20
unknown

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comp(19963..20250)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_73_21
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

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comp(20431..21846)
DNA (1416bp) protein (472aa)
Peptidase C10 family protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8GSR2_9BACT
Peptidase C10 family protein {ECO:0000313|EMBL:EPT34755.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
L3_072_000M1_scaffold_73_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22024..22767
DNA (744bp) protein (248aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=root RepID=B0MSX7_9BACT
L3_072_000M1_scaffold_73_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22772..24115
DNA (1344bp) protein (448aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Signal peptidase I n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIL7_9BACT
signal peptidase I
L3_072_000M1_scaffold_73_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24126..24740
DNA (615bp) protein (205aa)
Putative YigZ family protein n=2 Tax=root RepID=R7JIG9_9BACT
Putative YigZ family protein {ECO:0000313|EMBL:CDE63719.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_73_25
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24733..27516
DNA (2784bp) protein (928aa)
Excinuclease ABC subunit A n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPQ5_9BACT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Excinuclease ABC subunit A
L3_072_000M1_scaffold_73_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27513..28733
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003068CDB
Predicted Zn-dependent peptidases
Predicted Zn-dependent peptidases {ECO:0000313|EMBL:CBK64918.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_73_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28790..29371
DNA (582bp) protein (194aa)
O-methyltransferase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSX2_9BACT
O-methyltransferase {ECO:0000313|EMBL:EDS04488.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Predicted O-methyltransferase
L3_072_000M1_scaffold_73_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29372..31219
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E2FB3F
PQQ enzyme repeat protein {ECO:0000313|EMBL:EFR58648.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
WD40-like repeat protein
L3_072_000M1_scaffold_73_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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31232..32587
DNA (1356bp) protein (452aa)
Glutamate dehydrogenase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4Y0_9BACT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glutamate dehydrogenase/leucine dehydrogenase
L3_072_000M1_scaffold_73_30
unknown

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33069..33404
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying items 1-30 of 115 in total

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