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L3_072_000M1_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 224 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_149_1
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E0S4_9BACL
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EMT52896.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
L3_072_000M1_scaffold_149_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(244..2052)
DNA (1809bp) protein (603aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EFR57398.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFR57398.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Putative Zn-dependent peptidase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YPU3_ALIFI
Zn-dependent peptidase
L3_072_000M1_scaffold_149_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2034..3071)
DNA (1038bp) protein (346aa)
Peptidase M16 inactive domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XS16_9BACT
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD24450.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Zn-dependent peptidase
L3_072_000M1_scaffold_149_4
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3103..3309)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6SGP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC54551.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
transcriptional regulator, XRE family
L3_072_000M1_scaffold_149_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3571..4299
DNA (729bp) protein (243aa)
Acyl-ACP thioesterase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YPU7_ALIFI
acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:AFL79015.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_149_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4348..4866
DNA (519bp) protein (173aa)
Bacterioferritin {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000302084C
Bacterioferritin (cytochrome b1)
L3_072_000M1_scaffold_149_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5209..6345
DNA (1137bp) protein (379aa)
glycosyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI000318B1DE
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CCZ97042.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_149_8
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(6439..7329)
DNA (891bp) protein (297aa)
Putative uncharacterized protein id=3473870 bin=GWF2_Clostridiales_38_85 species=unknown genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L3_072_000M1_scaffold_149_9
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

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comp(7475..8923)
DNA (1449bp) protein (483aa)
Transporter, major facilitator family protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FAB9_9BACT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EPT32861.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
Nitrate/nitrite transporter
L3_072_000M1_scaffold_149_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8945..10936)
DNA (1992bp) protein (664aa)
Tetratricopeptide repeat protein n=2 Tax=Alistipes RepID=I3YPV2_ALIFI
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFL79020.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_149_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11065..11949)
DNA (885bp) protein (295aa)
GTPase Era n=1 Tax=Alistipes onderdonkii RepID=UPI0003688EAC
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
GTP-binding protein Era
L3_072_000M1_scaffold_149_12
unknown

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comp(12069..12224)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_072_000M1_scaffold_149_13
unknown

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12324..13595
DNA (1272bp) protein (424aa)

This feature has no annotations

L3_072_000M1_scaffold_149_14
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13677..15011)
DNA (1335bp) protein (445aa)
Signal recognition particle protein n=2 Tax=root RepID=R6WTE4_9BACT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L3_072_000M1_scaffold_149_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15104..15475)
DNA (372bp) protein (124aa)
dihydrolipoamide acyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI000360CE65
thioesterase
Thioesterase family protein {ECO:0000313|EMBL:CDD25019.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_072_000M1_scaffold_149_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15542..16120
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WMF7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97056.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_072_000M1_scaffold_149_17
unknown

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comp(16182..16715)
DNA (534bp) protein (178aa)

This feature has no annotations

L3_072_000M1_scaffold_149_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16935..18227
DNA (1293bp) protein (431aa)
Cysteate synthase n=1 Tax=Alistipes sp. HGB5 RepID=E4MD76_9BACT
cysteate synthase
Cysteate synthase {ECO:0000313|EMBL:EFR57094.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_072_000M1_scaffold_149_19
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18237..19217
DNA (981bp) protein (327aa)
Mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase class I n=1 Tax=Alistipes sp. CAG:157 RepID=R5WQS5_9BACT
Mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CCZ98271.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
L3_072_000M1_scaffold_149_20
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19258..19824)
DNA (567bp) protein (189aa)
NUDIX hydrolase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035D8B8E
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABN52819.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_072_000M1_scaffold_149_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19828..22059)
DNA (2232bp) protein (744aa)
DNA/RNA non-specific endonuclease n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MX20_9BACT
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:CDE63033.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
endonuclease
L3_072_000M1_scaffold_149_22
unknown

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comp(22080..22196)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_072_000M1_scaffold_149_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22300..22995)
DNA (696bp) protein (232aa)
Putative effector of murein hydrolase n=2 Tax=Alistipes RepID=D4IJL7_9BACT
Putative effector of murein hydrolase
Putative effector of murein hydrolase {ECO:0000313|EMBL:CBK63129.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_149_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22992..23396)
DNA (405bp) protein (135aa)
LrgA family protein n=3 Tax=Alistipes RepID=E4M8S0_9BACT
effector of murein hydrolase LrgA
LrgA family protein {ECO:0000313|EMBL:EFR58657.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_072_000M1_scaffold_149_25
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(23409..24551)
DNA (1143bp) protein (381aa)
Surface antigen, putative n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QTE0_CHLT3
surface antigen
Surface antigen, putative {ECO:0000313|EMBL:ACF12686.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
L3_072_000M1_scaffold_149_26
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24607..26145
DNA (1539bp) protein (513aa)
RNA methyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI0002F4EB5D
23S rRNA (uracil-5-)-methyltransferase RumA
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AFL77956.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_149_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26233..26916
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4P0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26294.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_072_000M1_scaffold_149_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27145..27828
DNA (684bp) protein (228aa)
Zn-dependent hydrolase n=1 Tax=Alistipes senegalensis RepID=UPI0002D3B1B8
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFR57700.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Zn-dependent hydrolase
L3_072_000M1_scaffold_149_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27836..28513
DNA (678bp) protein (226aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=4 Tax=root RepID=B0MTY9_9BACT
L3_072_000M1_scaffold_149_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28524..29660
DNA (1137bp) protein (379aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:AFL77950.1}; EC=2.4.1.182 {ECO:0000313|EMBL:AFL77950.1};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Lipid-A-disaccharide synthase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YLT2_ALIFI
Displaying items 1-30 of 224 in total

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