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L3_072_000M1_scaffold_573

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_573_1
Candidatus Sulcia muelleri, Candidatus Sulcia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..347
DNA (345bp) protein (115aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=595499 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Candidatus Sulcia.;" source="Sulcia muelleri (strain SMDSEM).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Sulcia muelleri (strain SMDSEM) RepID=C7LK58_SULMS
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
L3_072_000M1_scaffold_573_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(175..1869)
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037682A9
Uncharacterized protein {ECO:0000313|EMBL:CDD24490.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_072_000M1_scaffold_573_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1896..4829)
DNA (2934bp) protein (978aa)
TonB dependent receptor n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y780_9BACT
TonB dependent receptor {ECO:0000313|EMBL:CDD24491.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
TonB dependent receptor.
L3_072_000M1_scaffold_573_4
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4835..5881)
DNA (1047bp) protein (349aa)
nuclease n=1 Tax=Alistipes sp. JC136 RepID=UPI000289FEC1
Uncharacterized protein {ECO:0000313|EMBL:CCY51993.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
Predicted extracellular nuclease
L3_072_000M1_scaffold_573_5
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5909..7108)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KXH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE80418.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
endonuclease
L3_072_000M1_scaffold_573_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7188..10022)
DNA (2835bp) protein (945aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037FF1DC
Uncharacterized protein {ECO:0000313|EMBL:CDD25025.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_072_000M1_scaffold_573_7
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10219..10683)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003068025
Uncharacterized protein {ECO:0000313|EMBL:CDC97363.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L3_072_000M1_scaffold_573_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10680..11111)
DNA (432bp) protein (144aa)
glycosyl transferase family 2 n=1 Tax=Alistipes senegalensis RepID=UPI00036C34E9
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AFL79003.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_573_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11125..11547)
DNA (423bp) protein (141aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFR57337.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFR57337.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Glycosyl transferase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YPT5_ALIFI
glycosyl transferase family protein
L3_072_000M1_scaffold_573_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11537..12139)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MX69_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02233.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_573_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12352..13368)
DNA (1017bp) protein (339aa)
aminodeoxychorismate lyase n=1 Tax=Alistipes sp. JC136 RepID=UPI000288204B
Predicted periplasmic solute-binding protein
Predicted periplasmic solute-binding protein {ECO:0000313|EMBL:CBK65009.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_573_12
unknown

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13824..13970
DNA (147bp) protein (49aa)

This feature has no annotations

L3_072_000M1_scaffold_573_13
unknown

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14005..15444
DNA (1440bp) protein (480aa)

This feature has no annotations

L3_072_000M1_scaffold_573_14
unknown

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comp(15656..15847)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_072_000M1_scaffold_573_15
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15952..17037
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6E8W4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA93704.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
hypothetical protein
L3_072_000M1_scaffold_573_16
Bacteroides sp. CAG:1060, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17075..18457
DNA (1383bp) protein (461aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1262734 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1060.;"
Polyamine ABC transporter n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BFY2_9BACE
spermidine/putrescine transport ATP-binding protein
L3_072_000M1_scaffold_573_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18514..19266
DNA (753bp) protein (251aa)
ABC transporter, permease protein n=5 Tax=Parabacteroides RepID=C7X912_9PORP
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:EFI09300.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
putrescine transport system permease PotH
L3_072_000M1_scaffold_573_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19263..20069
DNA (807bp) protein (269aa)
Putrescine transport system permease protein PotI n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IUK1_9PORP
Spermidine/putrescine transport system permease {ECO:0000313|EMBL:KEJ87358.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
putrescine transport system permease PotI
L3_072_000M1_scaffold_573_19
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20080..21390
DNA (1311bp) protein (437aa)
Spermidine/putrescine transport system substrate-binding protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I2D6_9BACE
Spermidine/putrescine transport system substrate-binding protein {ECO:0000313|EMBL:EOS10379.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
ABC transporter lipoprotein
L3_072_000M1_scaffold_573_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21459..23126)
DNA (1668bp) protein (556aa)
transporter n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000365515E
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDE64021.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
permease
L3_072_000M1_scaffold_573_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23325..24509
DNA (1185bp) protein (395aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSS0_9BACT
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CDD24695.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
aspartate/tyrosine/aromatic aminotransferase
L3_072_000M1_scaffold_573_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24646..25536
DNA (891bp) protein (297aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Alistipes indistinctus YIT 12060 RepID=G5HBN2_9BACT
glucose-1-phosphate thymidylyltransferase
L3_072_000M1_scaffold_573_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25527..26102
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003066646
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDD26252.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
L3_072_000M1_scaffold_573_24
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26095..26964
DNA (870bp) protein (290aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S1S5_9PORP
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EHL88087.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
L3_072_000M1_scaffold_573_25
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26972..28093
DNA (1122bp) protein (374aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bacteroides sp. D2 RepID=E5C805_9BACE
dTDP-glucose 4,6-dehydratase
L3_072_000M1_scaffold_573_26
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28101..29405
DNA (1305bp) protein (435aa)
PTS system polysaccharide transporter n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JB55_9BACE
PTS system polysaccharide transporter {ECO:0000313|EMBL:CCY49909.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
PTS system polysaccharide transporter
L3_072_000M1_scaffold_573_27
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29405..30667
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Porphyromonas gingivalis RepID=Q7MXR0_PORGI
Uncharacterized protein {ECO:0000313|EMBL:KKD59395.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;"
hypothetical protein
L3_072_000M1_scaffold_573_28
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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30672..31820
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HH55_9BACE
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADW16536.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
L3_072_000M1_scaffold_573_29
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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31798..33027
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000375026E
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EHG98434.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
glycosyl transferase
L3_072_000M1_scaffold_573_30
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33017..33463
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E60201
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDB06893.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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