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L3_072_000M1_scaffold_1239

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1239_1
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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379..1710
DNA (1332bp) protein (444aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G119_9PROT
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
L3_072_000M1_scaffold_1239_2
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1767..4427
DNA (2661bp) protein (887aa)
DNA mismatch repair protein MutS n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VXR1_9DELT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
DNA mismatch repair protein MutS
L3_072_000M1_scaffold_1239_3
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4446..6647
DNA (2202bp) protein (734aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW08_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
DNA mismatch repair protein MutL
L3_072_000M1_scaffold_1239_4
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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6644..7564
DNA (921bp) protein (307aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
miaA; tRNA dimethylallyltransferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Caloramator australicus RC3 RepID=I7LFN2_9CLOT
L3_072_000M1_scaffold_1239_5
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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7625..8875
DNA (1251bp) protein (417aa)
Aluminium resistance protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HLK6_9FIRM
Aluminium resistance protein {ECO:0000313|EMBL:CDB26847.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
aluminum resistance protein
L3_072_000M1_scaffold_1239_6
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9191..9667
DNA (477bp) protein (159aa)
Transcriptional regulator AsnC family n=1 Tax=Clostridium sp. CAG:632 RepID=R5K227_9CLOT
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CCY59139.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
transcriptional regulator
L3_072_000M1_scaffold_1239_7
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9701..11950)
DNA (2250bp) protein (750aa)
Penicillin-binding protein 1A family n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FJG1_9FIRM
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CCY03749.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
1A family penicillin-binding protein
L3_072_000M1_scaffold_1239_8
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12157..13134
DNA (978bp) protein (326aa)
D-lactate dehydrogenase (EC:1.1.1.28)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002D4E3DD
Uncharacterized protein {ECO:0000313|EMBL:EWM52453.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
L3_072_000M1_scaffold_1239_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13184..14350)
DNA (1167bp) protein (389aa)
UPF0348 protein Toce_1046 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3P6_9PROT
UPF0348 protein Toce_1046 {ECO:0000313|EMBL:CDE21338.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1239_10
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14530..15528
DNA (999bp) protein (333aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5W3S8_9DELT
Phosphate acetyltransferase {ECO:0000313|EMBL:CCZ94804.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L3_072_000M1_scaffold_1239_11
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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15556..16749
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VWK4_9DELT
L3_072_000M1_scaffold_1239_12
unknown

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16901..17350
DNA (450bp) protein (150aa)

This feature has no annotations

L3_072_000M1_scaffold_1239_13
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17392..17577
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUW3_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
50S ribosomal protein L32
L3_072_000M1_scaffold_1239_14
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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17999..20506
DNA (2508bp) protein (836aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EDR97872.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EDR97872.1};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MD52_9FIRM
L3_072_000M1_scaffold_1239_15
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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20598..20936
DNA (339bp) protein (113aa)
Transcriptional regulator ArsR family n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G0S7_9PROT
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDE21074.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
regulatory protein ArsR
L3_072_000M1_scaffold_1239_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21057..22880
DNA (1824bp) protein (608aa)
UvrABC system protein C n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FYD4_9PROT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
UvrABC system protein C
L3_072_000M1_scaffold_1239_17
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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22913..23746
DNA (834bp) protein (278aa)
Cof-like hydrolase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CW76_PAESJ
cof family hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:ACS99939.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_072_000M1_scaffold_1239_18
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23808..24728
DNA (921bp) protein (307aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
HPr kinase/phosphorylase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FXD2_9PROT
HPr kinase
L3_072_000M1_scaffold_1239_19
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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24736..26427
DNA (1692bp) protein (564aa)
Peptidase U32 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BU10_9FIRM
Peptidase U32 {ECO:0000313|EMBL:CDD69017.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
protease
Displaying 19 items

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