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L3_072_000M1_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 283 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_9_1
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(462..998)
DNA (537bp) protein (179aa)
Rubrerythrin n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUH0_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL41462.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_072_000M1_scaffold_9_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1065..1436)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KKR4_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDN01242.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Fe2+/Zn2+ uptake regulation proteins
L3_072_000M1_scaffold_9_3
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1502..1756)
DNA (255bp) protein (85aa)
IS605/IS200-like transposase n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5ML61_9BACL
IS605/IS200-like transposase {ECO:0000313|EMBL:ELK38995.1}; TaxID=1246477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
transposase IS605
L3_072_000M1_scaffold_9_4
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1798..2571)
DNA (774bp) protein (258aa)
Phosphoribosyltransferase n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K7X4_9FIRM
Phosphoribosyltransferase {ECO:0000313|EMBL:CDE72390.1}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
phosphoribosyltransferase
L3_072_000M1_scaffold_9_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2677..3696)
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Z3_9FIRM
hypothetical protein
L3_072_000M1_scaffold_9_6
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3943..4878)
DNA (936bp) protein (312aa)
fba; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VVJ7_9DELT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCZ94913.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L3_072_000M1_scaffold_9_7
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(5025..5960)
DNA (936bp) protein (312aa)
ABC-2 type transporter n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XR60_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:CDD21539.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
ABC-2 type transporter.
L3_072_000M1_scaffold_9_8
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(5957..6931)
DNA (975bp) protein (325aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D6V4_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX71611.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
antibiotic transport system ATP-binding protein
L3_072_000M1_scaffold_9_9
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6928..7557)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B5155A
Uncharacterized protein {ECO:0000313|EMBL:CCZ09840.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
TetR family transcriptional regulator
L3_072_000M1_scaffold_9_10
unknown

Not on your lists

comp(7623..7766)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_072_000M1_scaffold_9_11
unknown

Not on your lists

comp(7763..8728)
DNA (966bp) protein (322aa)

This feature has no annotations

L3_072_000M1_scaffold_9_12
unknown

Not on your lists

comp(8738..9358)
DNA (621bp) protein (207aa)

This feature has no annotations

L3_072_000M1_scaffold_9_13
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9517..9717
DNA (201bp) protein (67aa)
Predicted transcriptional regulators n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K997_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDE72934.1}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
L3_072_000M1_scaffold_9_14
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9872..10135)
DNA (264bp) protein (88aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=1 Tax=Clostridium sp. CAG:349 RepID=R6WGA0_9CLOT
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:CDD10118.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
histidine triad (HIT) protein
L3_072_000M1_scaffold_9_15
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10173..12344)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z6H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11411.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L3_072_000M1_scaffold_9_16
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12435..12773)
DNA (339bp) protein (113aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=1 Tax=Clostridium sp. CAG:349 RepID=R6WGA0_9CLOT
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:CDD10118.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
histidine triad (HIT) protein
L3_072_000M1_scaffold_9_17
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12792..14159)
DNA (1368bp) protein (456aa)
tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G610_9PROT
tRNA-I(6)A37 thiotransferase enzyme MiaB {ECO:0000313|EMBL:CDE22386.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
MiaB-like tRNA modifying enzyme
L3_072_000M1_scaffold_9_18
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14156..14896)
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:169 RepID=R6BCC2_9CLOT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
L3_072_000M1_scaffold_9_19
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14893..15867)
DNA (975bp) protein (325aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
prmA; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G5H5_9PROT
L3_072_000M1_scaffold_9_20
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15864..16766)
DNA (903bp) protein (301aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R1T1_9FIRM
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CDF44619.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
glycosyl transferase family protein
L3_072_000M1_scaffold_9_21
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16763..17572)
DNA (810bp) protein (270aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E7H5_9FIRM
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCX84071.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
phospholipid/glycerol acyltransferase
L3_072_000M1_scaffold_9_22
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17822..18991)
DNA (1170bp) protein (390aa)
Chaperone protein DnaJ n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1P0_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
chaperone protein DnaJ
L3_072_000M1_scaffold_9_23
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19117..20928)
DNA (1812bp) protein (604aa)
Chaperone protein DnaK n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4F0_9PROT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
dnaK; molecular chaperone DnaK
L3_072_000M1_scaffold_9_24
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21400..22602
DNA (1203bp) protein (401aa)
L-serine ammonia-lyase n=1 Tax=Clostridium sp. CAG:448 RepID=R6SS87_9CLOT
L-serine ammonia-lyase {ECO:0000313|EMBL:CDC60399.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
serine dehydratase
L3_072_000M1_scaffold_9_25
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22704..23678
DNA (975bp) protein (325aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
ATPase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FLP2_9FIRM
ATPase {ECO:0000313|EMBL:CCY04524.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
L3_072_000M1_scaffold_9_26
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

23713..24810
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GW96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25526.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
hypothetical protein
L3_072_000M1_scaffold_9_27
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25057..26097)
DNA (1041bp) protein (347aa)
Putative RNA-binding protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4S5_9PROT
Putative RNA-binding protein {ECO:0000313|EMBL:CDE22145.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_9_28
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

comp(26140..27507)
DNA (1368bp) protein (456aa)
Membrane protein insertase YidC n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GWI6_9FIRM
Membrane protein insertase YidC {ECO:0000313|EMBL:CDB26029.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
YidC/Oxa1 family membrane protein insertase
L3_072_000M1_scaffold_9_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27549..27890)
DNA (342bp) protein (114aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Eubacterium RepID=C0F0A9_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_072_000M1_scaffold_9_30
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27887..28300)
DNA (414bp) protein (138aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Ribonuclease P protein component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G803_9PROT
rnpA; ribonuclease P
Displaying items 1-30 of 283 in total

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