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L3_072_000M1_scaffold_678

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_678_1
unknown

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3..1808
DNA (1806bp) protein (602aa)

This feature has no annotations

L3_072_000M1_scaffold_678_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1731..2657)
DNA (927bp) protein (309aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Putative Holliday junction resolvase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FVT3_9PROT
Holliday junction resolvase
L3_072_000M1_scaffold_678_3
unknown

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comp(2731..3024)
DNA (294bp) protein (98aa)

This feature has no annotations

L3_072_000M1_scaffold_678_4
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(3123..4925)
DNA (1803bp) protein (601aa)
ABC transporter n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GKA3_9FIRM
ABC transporter {ECO:0000313|EMBL:CDB25928.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
ABC transporter
L3_072_000M1_scaffold_678_5
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5051..6190)
DNA (1140bp) protein (380aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FXQ2_9PROT
tgt; queuine tRNA-ribosyltransferase
L3_072_000M1_scaffold_678_6
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6302..7570)
DNA (1269bp) protein (423aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K414_9FIRM
L3_072_000M1_scaffold_678_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7665..9476)
DNA (1812bp) protein (604aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Clostridium sp. CAG:352 RepID=R6R8P5_9CLOT
L3_072_000M1_scaffold_678_8
unknown

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comp(9835..10215)
DNA (381bp) protein (127aa)

This feature has no annotations

L3_072_000M1_scaffold_678_9
unknown

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comp(10406..11017)
DNA (612bp) protein (204aa)

This feature has no annotations

L3_072_000M1_scaffold_678_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11240..11794
DNA (555bp) protein (185aa)
Sporulation protein YyaC n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FYH0_9PROT
Sporulation protein YyaC {ECO:0000313|EMBL:CDE18727.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
sporulation protein YyaC
L3_072_000M1_scaffold_678_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12534..14585
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2APT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67849.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_072_000M1_scaffold_678_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14703..16817)
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2APT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67849.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_072_000M1_scaffold_678_13
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17426..18460)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FBM3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK06833.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
integrase family protein
L3_072_000M1_scaffold_678_14
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18477..19124)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FX14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY04751.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
L3_072_000M1_scaffold_678_15
unknown

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19223..19540
DNA (318bp) protein (106aa)

This feature has no annotations

L3_072_000M1_scaffold_678_16
unknown

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19776..20003
DNA (228bp) protein (76aa)

This feature has no annotations

L3_072_000M1_scaffold_678_17
Enterococcus raffinosus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20095..21339
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Enterococcus raffinosus ATCC 49464 RepID=R2PE54_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH82642.1}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 49464.;"
Phage integrase
L3_072_000M1_scaffold_678_18
unknown

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21705..21929
DNA (225bp) protein (75aa)

This feature has no annotations

L3_072_000M1_scaffold_678_19
unknown

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comp(22278..25376)
DNA (3099bp) protein (1033aa)

This feature has no annotations

L3_072_000M1_scaffold_678_20
unknown

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comp(25490..26701)
DNA (1212bp) protein (404aa)

This feature has no annotations

L3_072_000M1_scaffold_678_21
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(26719..29172)
DNA (2454bp) protein (818aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HIA9_9BACL
Putative uncharacterized protein {ECO:0000313|EMBL:EHB63082.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
L3_072_000M1_scaffold_678_22
unknown

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comp(29219..30850)
DNA (1632bp) protein (544aa)
sugar ABC transporter periplasmic protein
L3_072_000M1_scaffold_678_23
Acholeplasma laidlawii, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(30896..31834)
DNA (939bp) protein (313aa)
ABC-type transport system, permease component n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NH46_ACHLI
ABC transporter permease
ABC-type transport system, permease component {ECO:0000313|EMBL:ABX81676.1}; TaxID=441768 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma laidlawii (strain PG-8A).;"
L3_072_000M1_scaffold_678_24
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31850..32806)
DNA (957bp) protein (319aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1E4_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE21249.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC-type carbohydrate transport system, permease component
L3_072_000M1_scaffold_678_25
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32803..36036)
DNA (3234bp) protein (1078aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E2A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA90706.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L3_072_000M1_scaffold_678_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36323..37189
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369E540
Uncharacterized protein {ECO:0000313|EMBL:ENY98820.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transcriptional regulator, AraC family
L3_072_000M1_scaffold_678_27
Clostridium sp. CAG:307, Tenericutes, Bacteria

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37876..39252
DNA (1377bp) protein (459aa)
Predicted ATPase of the AAA superfamily n=1 Tax=Clostridium sp. CAG:307 RepID=R7GH42_9CLOT
Predicted ATPase of the AAA superfamily {ECO:0000313|EMBL:CDE26301.1}; TaxID=1262795 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
putative ATPase of the AAA superfamily
L3_072_000M1_scaffold_678_28
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39600..39899
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZCS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA36665.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
L3_072_000M1_scaffold_678_29
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39899..40357
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FNM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15287.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
hypothetical protein
L3_072_000M1_scaffold_678_30
unknown

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40380..40934
DNA (555bp) protein (185aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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