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L3_072_000M1_scaffold_869

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_869_1
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..141)
DNA (141bp) protein (47aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWI6_9FIRM
L3_072_000M1_scaffold_869_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281..589)
DNA (309bp) protein (103aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G568_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21172.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_869_3
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(614..1813)
DNA (1200bp) protein (400aa)
alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003608C2E
Uncharacterized protein {ECO:0000313|EMBL:EHL10092.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
L3_072_000M1_scaffold_869_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(1840..3999)
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TI45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71920.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_072_000M1_scaffold_869_5
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4010..4846)
DNA (837bp) protein (279aa)
Ketose-bisphosphate aldolase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENE7_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:CDE04185.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
fructose-bisphosphate aldolase
L3_072_000M1_scaffold_869_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(4850..5785)
DNA (936bp) protein (312aa)
PfkB domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMF6_9FIRM
PfkB domain protein {ECO:0000313|EMBL:CCY43280.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
sugar kinase
L3_072_000M1_scaffold_869_7
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5817..6761)
DNA (945bp) protein (315aa)
Glucosamine-6-phosphate isomerase putative n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D9X9_9FIRM
Glucosamine-6-phosphate isomerase putative {ECO:0000313|EMBL:CDD87429.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase
L3_072_000M1_scaffold_869_8
CG_Elusi_02, Elusimicrobia, Bacteria

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comp(6835..7539)
DNA (705bp) protein (235aa)
LmbE family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IK08_9FIRM
LmbE family protein
Tax=CG_Elusi_02
L3_072_000M1_scaffold_869_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7617..7886)
DNA (270bp) protein (90aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3V4_9PROT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDE22114.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_869_10
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8424..9716)
DNA (1293bp) protein (431aa)
Alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:KHF34067.1}; EC=3.2.1.49 {ECO:0000313|EMBL:KHF34067.1};; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G640_9FIRM
oxidoreductase, Gfo/Idh/MocA family
L3_072_000M1_scaffold_869_11
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9750..11882)
DNA (2133bp) protein (711aa)
Alpha-L-fucosidase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G0C0_9PROT
Alpha-L-fucosidase {ECO:0000313|EMBL:CDE20914.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_869_12
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..13860)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4D3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21806.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_869_13
unknown

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comp(13861..15648)
DNA (1788bp) protein (596aa)

This feature has no annotations

L3_072_000M1_scaffold_869_14
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15645..16517)
DNA (873bp) protein (291aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G060_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE20854.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC-type carbohydrate transport system, permease component
L3_072_000M1_scaffold_869_15
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16532..17464)
DNA (933bp) protein (311aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4B9_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE22010.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC transporter permease
L3_072_000M1_scaffold_869_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17489..19183)
DNA (1695bp) protein (565aa)
ABC transporter solute-binding protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4B6_9PROT
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDE20852.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_869_17
unknown

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comp(19210..21450)
DNA (2241bp) protein (747aa)

This feature has no annotations

L3_072_000M1_scaffold_869_18
unknown

Not on your lists

comp(21468..21596)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_072_000M1_scaffold_869_19
unknown

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comp(21830..25990)
DNA (4161bp) protein (1387aa)

This feature has no annotations

L3_072_000M1_scaffold_869_20
unknown

Not on your lists

comp(25987..26142)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_072_000M1_scaffold_869_21
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26471..27316
DNA (846bp) protein (282aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:678 RepID=R5L594_9CLOT
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CDB93105.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_869_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27361..28296
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QMJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32066.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
glycosyl hydrolase, family 43
L3_072_000M1_scaffold_869_23
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28465..29007
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FUV8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE18268.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_869_24
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29064..30200)
DNA (1137bp) protein (379aa)
HipA domain protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQP4_9CLOT
HipA domain protein {ECO:0000313|EMBL:CDD09264.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_869_25
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(30197..30487)
DNA (291bp) protein (97aa)
Transcriptional regulator n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KK70_ACHPJ
Helix-turn-helix protein {ECO:0000313|EMBL:KFZ27417.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
Transcriptional regulator
L3_072_000M1_scaffold_869_26
unknown

Not on your lists

comp(30736..30918)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_072_000M1_scaffold_869_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30940..32055)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B4Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56079.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_072_000M1_scaffold_869_28
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32980..33336
DNA (357bp) protein (119aa)
Putative helix-turn-helix protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FUE1_9PROT
Putative helix-turn-helix protein {ECO:0000313|EMBL:CDE18138.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Helix-turn-helix domain protein
Displaying 28 items

View Taxonomy