ggKbase home page

L3_072_000M1_scaffold_742_9

Organism: dasL3_072_000M1_concoct_34_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 9509..10222

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LX86_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 238.0
  • Bit_score: 290
  • Evalue 1.10e-75
RNA polymerase sigma-29 subunit SigE similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 238.0
  • Bit_score: 290
  • Evalue 3.20e-76
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 238.0
  • Bit_score: 290
  • Evalue 1.60e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
TTGAAATTTATAGAAGTGTTACGGAGTTTTTTACGCAGGATAGACGCAGAGGACGCGGTGGATTACGTATGCGGCACGGAAGCGCTGCCGCTGCCTTTTTCGCCGCAGGAAGAACGCGAGATGCTGGAGAAACTGGAAAAGGGCGAAGAGAGAGAAGCCGATAAAATCAAGGGTGAGTTGATCAAGCACAATCTGCGCCTTGTGATTTATATCGCGCGGAAATTCGATAACACGGGCGTGGACGGCGACGATCTGGTTTCGATTGGTACGATAGGCTTGATCAAGGCGATCAATTCGTTCCGCTCGGATAAAAACATCAAGCTTGCCACATACGCTTCGCGGTGCATAGAAAACGAAATTTTAATGTATCTCAGGCGGACGGCGCGCCTGAAAAGCGAGGTTTCGTTCGACGAGCCTCTGAATACGGATTTCGAGGGAAACGAACTGCTGTTATCGGACGTGATGGGTACAAGCGCGGAAAGCGTGTACGGCGGCGTGGAGGACCGCGCGGAAAAGGAACTGTTAAAGGACGCACTGACGAAACTTTCGGAGCGGGAACGCAAGATTATGTTTTTGCGCTTCGGCCTTTCCGGCGGCGAAGAAATGACGCAGAAGGACGTGGCGGATATGCTGGGAATTTCGCAGAGCTATATTTCGAGATTGGAAAAAAAGATTATTCAGCGGCTGAAAAAGGAAATTTCGAAAATGGTGTGA
PROTEIN sequence
Length: 238
LKFIEVLRSFLRRIDAEDAVDYVCGTEALPLPFSPQEEREMLEKLEKGEEREADKIKGELIKHNLRLVIYIARKFDNTGVDGDDLVSIGTIGLIKAINSFRSDKNIKLATYASRCIENEILMYLRRTARLKSEVSFDEPLNTDFEGNELLLSDVMGTSAESVYGGVEDRAEKELLKDALTKLSERERKIMFLRFGLSGGEEMTQKDVADMLGISQSYISRLEKKIIQRLKKEISKMV*