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L3_072_000M1_scaffold_1067

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1067_1
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..561)
DNA (561bp) protein (187aa)
NADPH-NAD transhydrogenase beta subunit n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYE9_9CLOT
NADPH-NAD transhydrogenase beta subunit
NADPH-NAD transhydrogenase beta subunit {ECO:0000313|EMBL:BAG33641.1}; TaxID=431947 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257).;"
L3_072_000M1_scaffold_1067_2
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(624..2726)
DNA (2103bp) protein (701aa)
NADPH-NAD transhydrogenase beta subunit n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYE9_9CLOT
NADPH-NAD transhydrogenase beta subunit {ECO:0000313|EMBL:CDD09056.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
pntB; NAD(P) transhydrogenase subunit beta
L3_072_000M1_scaffold_1067_3
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3125..4291)
DNA (1167bp) protein (389aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Clostridium sp. CAG:349 RepID=R6XS01_9CLOT
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:CDD09057.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_4
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4355..4840)
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator AldR n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDB1_9CLOT
AsnC family transcriptional regulator AldR {ECO:0000313|EMBL:CDD09058.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
aldR; AsnC family transcriptional regulator AldR
L3_072_000M1_scaffold_1067_5
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5040..6254)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XXN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA19360.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
L3_072_000M1_scaffold_1067_6
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6444..6779
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WI53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09060.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_1067_7
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6781..7629
DNA (849bp) protein (283aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYF2_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD09061.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_8
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7679..8968
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XS05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09062.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
uncharacterized protein containing a NRPS condensation domain
L3_072_000M1_scaffold_1067_9
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9039..9866)
DNA (828bp) protein (276aa)
Nucleotide-binding protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDB6_9CLOT
Nucleotide-binding protein {ECO:0000313|EMBL:CDD09063.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
ParA/MinD-like ATPase
L3_072_000M1_scaffold_1067_10
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9871..10326)
DNA (456bp) protein (152aa)
low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQ65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09064.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_11
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10414..11196
DNA (783bp) protein (261aa)
UPI0003015182 related cluster n=1 Tax=unknown RepID=UPI0003015182
Putative integral membrane protein {ECO:0000313|EMBL:CDA91299.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Predicted permeases
L3_072_000M1_scaffold_1067_12
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11246..13732)
DNA (2487bp) protein (829aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYF5_9CLOT
ATPase P-type (Transporting) HAD superfamily subfamily IC {ECO:0000313|EMBL:CDD09066.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
cation-transporting ATPase
L3_072_000M1_scaffold_1067_13
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13884..15134)
DNA (1251bp) protein (417aa)
Peptidase M28 n=1 Tax=Clostridium sp. CAG:349 RepID=R6XS08_9CLOT
Peptidase M28 {ECO:0000313|EMBL:CDD09067.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_14
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15271..16059)
DNA (789bp) protein (263aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDC0_9CLOT
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:CDD09068.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
helix-turn-helix domain-containing protein
L3_072_000M1_scaffold_1067_15
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16145..16849)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQ69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09069.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_1067_16
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16851..18419)
DNA (1569bp) protein (523aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WI57_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD09070.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_1067_17
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18578..20320)
DNA (1743bp) protein (581aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYF8_9CLOT
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDD09071.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_18
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20493..22289)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XS10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09072.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
ABC transporter, ATP-binding protein
L3_072_000M1_scaffold_1067_19
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22286..24022)
DNA (1737bp) protein (579aa)
xenobiotic ABC transporter ATPase (EC:3.6.3.44)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDC3_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD09073.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_20
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24367..25323)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQ73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09074.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1067_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25436..26089)
DNA (654bp) protein (218aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MR70_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY92204.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
membrane protein
L3_072_000M1_scaffold_1067_22
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26091..26960)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PJB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC09877.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_072_000M1_scaffold_1067_23
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27927..28838)
DNA (912bp) protein (304aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WI61_9CLOT
L3_072_000M1_scaffold_1067_24
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28840..29637)
DNA (798bp) protein (266aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
OAH/OAS sulfhydrylase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYG2_9CLOT
OAH/OAS sulfhydrylase {ECO:0000313|EMBL:CDD09076.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Displaying 24 items

View Taxonomy