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L3_072_000M1_scaffold_1295

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1295_1
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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2..169
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G2B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07047.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L3_072_000M1_scaffold_1295_2
unknown

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268..486
DNA (219bp) protein (73aa)

This feature has no annotations

L3_072_000M1_scaffold_1295_3
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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982..1860
DNA (879bp) protein (293aa)
Amino acid ABC superfamily ATP binding cassette transporter amino acid-binding/permease protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WIR8_9CLOT
Amino acid ABC superfamily ATP binding cassette transporter amino acid-binding/permease protein {ECO:0000313|EMBL:CDD09325.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
amino acid ABC transporter substrate-binding protein
L3_072_000M1_scaffold_1295_4
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1900..2667
DNA (768bp) protein (256aa)
Amino acid ABC superfamily ATP binding cassette transporter membrane protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQW1_9CLOT
Amino acid ABC superfamily ATP binding cassette transporter membrane protein {ECO:0000313|EMBL:CDD09324.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
polar amino acid ABC transporter inner membrane subunit
L3_072_000M1_scaffold_1295_5
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2660..3472
DNA (813bp) protein (271aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDX8_9CLOT
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:CDD09323.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1295_6
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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3673..4977
DNA (1305bp) protein (435aa)
Nucleoside-binding protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUR0_9FIRM
Nucleoside-binding protein {ECO:0000313|EMBL:CDD68803.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
nucleoside-binding protein
L3_072_000M1_scaffold_1295_7
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5110..6960
DNA (1851bp) protein (617aa)
Phage putative tail component protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WZ14_9CLOT
Phage putative tail component protein {ECO:0000313|EMBL:CDD09321.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
ABC transporter
L3_072_000M1_scaffold_1295_8
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6957..8318
DNA (1362bp) protein (454aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WIR2_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDD09320.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
ABC transporter permease
L3_072_000M1_scaffold_1295_9
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8315..9259
DNA (945bp) protein (315aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQV7_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDD09319.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
nucleoside ABC transporter membrane protein
L3_072_000M1_scaffold_1295_10
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9263..9856
DNA (594bp) protein (198aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Thymidine kinase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDX2_9CLOT
thymidine kinase
L3_072_000M1_scaffold_1295_11
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9853..10464
DNA (612bp) protein (204aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
uridine/cytidine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XSN7_9CLOT
L3_072_000M1_scaffold_1295_12
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10826..12757)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WI33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09035.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1295_13
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12757..15063)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQ44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09034.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1295_14
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15611..16780
DNA (1170bp) protein (390aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WD90_9CLOT
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:CDD09033.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1295_15
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16806..17456
DNA (651bp) protein (217aa)
Predicted Zn-dependent hydrolases of the beta-lactamase fold n=1 Tax=Clostridium sp. CAG:349 RepID=R6XRY7_9CLOT
Predicted Zn-dependent hydrolases of the beta-lactamase fold {ECO:0000313|EMBL:CDD09032.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Zn-dependent hydrolase
L3_072_000M1_scaffold_1295_16
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17579..19009
DNA (1431bp) protein (477aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
rho; transcription termination factor Rho (EC:3.6.1.-)
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYC9_9CLOT
L3_072_000M1_scaffold_1295_17
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19068..19655
DNA (588bp) protein (196aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WI30_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDD09030.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_1295_18
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(19901..20245)
DNA (345bp) protein (115aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
mRNA interferase n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K8N2_9FIRM
transcriptional modulator of MazE/toxin MazF
L3_072_000M1_scaffold_1295_19
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20404..21336
DNA (933bp) protein (311aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XVC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10232.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1295_20
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21336..21992
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase subfamily IA variant 1 n=1 Tax=Clostridium sp. CAG:349 RepID=R6WGI9_9CLOT
HAD-superfamily hydrolase subfamily IA variant 1 {ECO:0000313|EMBL:CDD10233.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
HAD-superfamily hydrolase
L3_072_000M1_scaffold_1295_21
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22178..22627
DNA (450bp) protein (150aa)
Sugar-phosphate isomerase RpiB/LacA/LacB family n=1 Tax=Clostridium sp. CAG:349 RepID=R6X1T7_9CLOT
Sugar-phosphate isomerase RpiB/LacA/LacB family {ECO:0000313|EMBL:CDD10241.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
RpiB/LacA/LacB family sugar-phosphate isomerase
L3_072_000M1_scaffold_1295_22
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22648..22974
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WGJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10243.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
atpH; A-type ATP synthase subunit H
L3_072_000M1_scaffold_1295_23
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22961..25012
DNA (2052bp) protein (684aa)
V-type ATPase 116 kDa subunit n=1 Tax=Clostridium sp. CAG:349 RepID=R6WLF0_9CLOT
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
V-type ATPase 116 kDa subunit
L3_072_000M1_scaffold_1295_24
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25026..25505
DNA (480bp) protein (160aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Clostridium sp. CAG:349 RepID=R6X1U1_9CLOT
ATP synthase subunit C {ECO:0000313|EMBL:CDD10246.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_1295_25
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25511..25672
DNA (162bp) protein (54aa)
V-type proton ATPase subunit E n=1 Tax=Clostridium sp. CAG:349 RepID=R6XVD7_9CLOT
V-type proton ATPase subunit E {ECO:0000313|EMBL:CDD10247.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Displaying 25 items

View Taxonomy