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L3_072_000M1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_27_1
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(2..223)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G2B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07047.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L3_072_000M1_scaffold_27_2
unknown

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1037..1237
DNA (201bp) protein (67aa)

This feature has no annotations

L3_072_000M1_scaffold_27_3
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1159..1566)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WMN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10685.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
phenylacetic acid degradation-related protein
L3_072_000M1_scaffold_27_4
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1568..2869)
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHV4_9CLOT
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CDD10683.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
pyrimidine-nucleoside phosphorylase
L3_072_000M1_scaffold_27_5
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2866..3240)
DNA (375bp) protein (125aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Clostridium sp. CAG:349 RepID=R6X349_9CLOT
Cytidine deaminase {ECO:0000313|EMBL:CDD10681.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_27_6
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(3270..3980)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BVD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD69058.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_072_000M1_scaffold_27_7
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(3980..4156)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BSW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68891.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_27_8
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(4174..4977)
DNA (804bp) protein (268aa)
2-hydroxyglutaryl-CoA dehydratase activator HgdC n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BJX6_9FIRM
2-hydroxyglutaryl-CoA dehydratase activator HgdC {ECO:0000313|EMBL:CDD65433.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hgdC; 2-hydroxyglutaryl-CoA dehydratase subunit C
L3_072_000M1_scaffold_27_9
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(5022..6551)
DNA (1530bp) protein (510aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUY1_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:CDD68893.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_072_000M1_scaffold_27_10
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(6548..7747)
DNA (1200bp) protein (400aa)
2-hydroxyglutaryl-CoA dehydratase D-component HgdB1 n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BI10_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component HgdB1 {ECO:0000313|EMBL:CDD65435.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hgdB1; 2-hydroxyglutaryl-CoA dehydratase subunit D
L3_072_000M1_scaffold_27_11
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

comp(7757..8602)
DNA (846bp) protein (282aa)
CO dehydrogenase maturation factor n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BT90_9FIRM
CO dehydrogenase maturation factor {ECO:0000313|EMBL:CDD69059.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
CO dehydrogenase maturation factor
L3_072_000M1_scaffold_27_12
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8830..9999)
DNA (1170bp) protein (390aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WUT0_9CLOT
L3_072_000M1_scaffold_27_13
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9992..10711)
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWN1_9CLOT
L3_072_000M1_scaffold_27_14
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10720..11379)
DNA (660bp) protein (220aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WML9_9CLOT
L3_072_000M1_scaffold_27_15
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11392..11916)
DNA (525bp) protein (175aa)
Methylmalonyl-CoA epimerase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHU3_9CLOT
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:CDD10673.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_27_16
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12085..12684
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10672.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
BioY family protein
L3_072_000M1_scaffold_27_17
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12828..14249
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WUR9_9CLOT
L3_072_000M1_scaffold_27_18
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14328..14768)
DNA (441bp) protein (147aa)
MOSC domain protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHT8_9CLOT
MOSC domain protein {ECO:0000313|EMBL:CDD10668.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
MOSC domain-containing protein
L3_072_000M1_scaffold_27_19
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14770..15252)
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWM4_9CLOT
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
molybdenum cofactor biosynthesis protein C
L3_072_000M1_scaffold_27_20
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15236..16165)
DNA (930bp) protein (310aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Clostridium sp. CAG:349 RepID=R6X339_9CLOT
GTP cyclohydrolase subunit MoaA
L3_072_000M1_scaffold_27_21
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16162..18030)
DNA (1869bp) protein (623aa)
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WML1_9CLOT
Molybdenum cofactor synthesis domain-containing protein {ECO:0000313|EMBL:CDD10665.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
moeA3; molybdenum cofactor biosynthesis protein MoeA
L3_072_000M1_scaffold_27_22
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18027..19241)
DNA (1215bp) protein (405aa)
Molybdopterin biosynthesis protein MoeA n=1 Tax=Clostridium sp. CAG:349 RepID=R6WUR4_9CLOT
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:CDD10664.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
molybdenum cofactor synthesis domain-containing protein
L3_072_000M1_scaffold_27_23
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19238..19735)
DNA (498bp) protein (166aa)
Molybdenum cofactor synthesis protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHT3_9CLOT
Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:CDD10663.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Molybdenum cofactor synthesis protein
L3_072_000M1_scaffold_27_24
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19732..20343)
DNA (612bp) protein (204aa)
Molybdopterin biosynthesis protein MoeB n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWL8_9CLOT
Molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:CDD10662.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
moeB; molybdopterin biosynthesis protein MoeB
L3_072_000M1_scaffold_27_25
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20343..20588)
DNA (246bp) protein (82aa)
Putative molybdopterin converting factor subunit 1 n=1 Tax=Clostridium sp. CAG:349 RepID=R6WMK5_9CLOT
Putative molybdopterin converting factor subunit 1 {ECO:0000313|EMBL:CDD10660.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_072_000M1_scaffold_27_26
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20585..22492)
DNA (1908bp) protein (636aa)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWK9_9CLOT
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:CDD10657.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_27_27
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22489..22881)
DNA (393bp) protein (131aa)
Electron transport complex RnfABCDGE type B subunit n=1 Tax=Clostridium sp. CAG:349 RepID=R6WMK0_9CLOT
Electron transport complex RnfABCDGE type B subunit {ECO:0000313|EMBL:CDD10655.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
RnfABCDGE type electron transport complex subunit B
L3_072_000M1_scaffold_27_28
unknown

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22925..23191
DNA (267bp) protein (89aa)

This feature has no annotations

L3_072_000M1_scaffold_27_29
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23191..24213
DNA (1023bp) protein (341aa)
Tungstate ABC transporter tungstate-binding protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWK5_9CLOT
Tungstate ABC transporter tungstate-binding protein {ECO:0000313|EMBL:CDD10652.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
tungstate ABC transporter permease
L3_072_000M1_scaffold_27_30
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24301..24915
DNA (615bp) protein (205aa)
ABC-type tungstate transport system periplasmic component n=1 Tax=Clostridium sp. CAG:349 RepID=R6X329_9CLOT
ABC-type tungstate transport system periplasmic component {ECO:0000313|EMBL:CDD10651.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
tungstate ABC transporter periplasmic protein
Displaying items 1-30 of 135 in total

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