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L3_072_000M1_scaffold_2038

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2038_1
unknown

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comp(217..363)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_072_000M1_scaffold_2038_2
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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447..671
DNA (225bp) protein (75aa)
Putative two-component response regulator n=1 Tax=Sutterella sp. CAG:397 RepID=R7C4K6_9BURK
Putative two-component response regulator {ECO:0000313|EMBL:CDD72702.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
L3_072_000M1_scaffold_2038_3
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(719..1252)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:397 RepID=R7C3P1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDD72701.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
L3_072_000M1_scaffold_2038_4
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1249..1701)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:397 RepID=R7C423_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDD72700.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
L3_072_000M1_scaffold_2038_5
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1701..2192)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:397 RepID=R7C3H9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDD72699.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
L3_072_000M1_scaffold_2038_6
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2182..2652)
DNA (471bp) protein (157aa)
Msha pilin protein mshc n=1 Tax=Sutterella sp. CAG:397 RepID=R7C5W5_9BURK
Msha pilin protein mshc {ECO:0000313|EMBL:CDD72698.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
L3_072_000M1_scaffold_2038_7
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3482)
DNA (822bp) protein (274aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Sutterella sp. CAG:397 RepID=R7C3N5_9BURK
peptidase A24A domain-containing protein
L3_072_000M1_scaffold_2038_8
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3493..4470)
DNA (978bp) protein (326aa)
Twitching motility protein n=1 Tax=Sutterella sp. CAG:397 RepID=R7C416_9BURK
Twitching motility protein {ECO:0000313|EMBL:CDD72695.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
twitching motility protein
L3_072_000M1_scaffold_2038_9
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4725..5153)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:397 RepID=R7BZY2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDD71275.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
hypothetical protein
L3_072_000M1_scaffold_2038_10
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5678..6895)
DNA (1218bp) protein (406aa)
Type II secretion system protein n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VEE4_DESVV
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ACL07984.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
L3_072_000M1_scaffold_2038_11
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6909..8627)
DNA (1719bp) protein (573aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8V5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43103.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
type II secretion system protein E
L3_072_000M1_scaffold_2038_12

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comp(8654..10228)
DNA (1575bp) protein (525aa)
Type II and III secretion system protein n=1 Tax=gut metagenome RepID=J9H3N3_9ZZZZ
Type II and III secretion system protein {ECO:0000313|EMBL:EJX08295.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
type II and III secretion system protein
L3_072_000M1_scaffold_2038_13

Not on your lists

comp(10233..10790)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9GLH6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX08294.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L3_072_000M1_scaffold_2038_14

Not on your lists

comp(10790..11341)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9GYL1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX08293.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L3_072_000M1_scaffold_2038_15
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11435..13072)
DNA (1638bp) protein (546aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8V9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43107.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_072_000M1_scaffold_2038_16
Sutterella sp. CAG:521, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13390..14793)
DNA (1404bp) protein (468aa)
Transposase IS4 family n=1 Tax=Sutterella sp. CAG:521 RepID=R7KT58_9BURK
Transposase IS4 family {ECO:0000313|EMBL:CDE78991.1}; TaxID=1262977 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:521.;"
transposase
L3_072_000M1_scaffold_2038_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14930..17056)
DNA (2127bp) protein (709aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMY8_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHQ45915.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
diguanylate cyclase (GGDEF) domain
L3_072_000M1_scaffold_2038_18
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17170..18483)
DNA (1314bp) protein (438aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4S9_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EFE45300.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L3_072_000M1_scaffold_2038_19
unknown

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18712..18804
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 19 items

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