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L3_072_000M1_scaffold_1920

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1920_1

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2..445
DNA (444bp) protein (148aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Translation elongation factor Tu n=1 Tax=gut metagenome RepID=J9G007_9ZZZZ
Translation elongation factor Tu {ECO:0000313|EMBL:EJX00542.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L3_072_000M1_scaffold_1920_2
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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644..1030
DNA (387bp) protein (129aa)
Protein translocase subunit SecE n=1 Tax=Sutterella sp. CAG:397 RepID=R7C1J8_9BURK
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
preprotein translocase, SecE subunit
L3_072_000M1_scaffold_1920_3
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1050..1610
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=1 Tax=Sutterella sp. CAG:397 RepID=R7C254_9BURK
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
antitermination protein NusG
L3_072_000M1_scaffold_1920_4
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1835..2266
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C3C0_9BURK
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
rplK; 50S ribosomal protein L11
L3_072_000M1_scaffold_1920_5
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2268..2960
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C259_9BURK
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
rplA; 50s ribosomal subunit protein l1 (rrna-binding translation regulation repressor rna-binding)
L3_072_000M1_scaffold_1920_6
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3360..3890
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C137_9BURK
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
rplJ; 50S ribosomal protein L10
L3_072_000M1_scaffold_1920_7
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3933..4313
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C194_9BURK
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
50S ribosomal protein L7/L12
L3_072_000M1_scaffold_1920_8
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4639..8826
DNA (4188bp) protein (1396aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Sutterella sp. CAG:397 RepID=R7C263_9BURK
L3_072_000M1_scaffold_1920_9
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8832..13220
DNA (4389bp) protein (1463aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=742823 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthensis 2_1_59BFAA.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sutterella wadsworthensis 2_1_59BFAA RepID=K1JYH1_9BURK
DNA-directed RNA polymerase subunit beta'
L3_072_000M1_scaffold_1920_10
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13329..14591)
DNA (1263bp) protein (421aa)
Amidohydrolase n=1 Tax=Sutterella sp. CAG:397 RepID=R7C1K9_9BURK
Amidohydrolase {ECO:0000313|EMBL:CDD71835.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
amidohydrolase
L3_072_000M1_scaffold_1920_11
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14617..15675)
DNA (1059bp) protein (353aa)
Adenosylhomocysteinase n=1 Tax=Sutterella sp. CAG:397 RepID=R7C3D4_9BURK
Adenosylhomocysteinase {ECO:0000313|EMBL:CDD71838.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
adenosylhomocysteinase
L3_072_000M1_scaffold_1920_12
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15993..16370
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C147_9BURK
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
30S ribosomal protein S12
L3_072_000M1_scaffold_1920_13
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16550..17020
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C1L4_9BURK
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
30S ribosomal protein S7
L3_072_000M1_scaffold_1920_14
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17096..19198
DNA (2103bp) protein (701aa)
Elongation factor G n=1 Tax=Sutterella sp. CAG:397 RepID=R7C1A1_9BURK
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:397.;"
elongation factor G
L3_072_000M1_scaffold_1920_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19283..19525
DNA (243bp) protein (81aa)
Elongation factor Tu n=5 Tax=Delftia acidovorans RepID=S2WE70_DELAC
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
translation elongation factor TU
Displaying 15 items

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