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L3_072_000M1_scaffold_3096

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3096_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

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comp(3..788)
DNA (786bp) protein (262aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H9S2_9SPIR
L3_072_000M1_scaffold_3096_2
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

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comp(772..1878)
DNA (1107bp) protein (369aa)
Radical SAM domain protein n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LX85_9FUSO
Radical SAM domain protein {ECO:0000313|EMBL:CDE92338.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Radical SAM domain protein
L3_072_000M1_scaffold_3096_3
unknown

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1955..2176
DNA (222bp) protein (74aa)

This feature has no annotations

L3_072_000M1_scaffold_3096_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

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comp(2231..5167)
DNA (2937bp) protein (979aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJG1_9SPIR
L3_072_000M1_scaffold_3096_5
Clostridium sp. CAG:967, Melainabacteria, Bacteria

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comp(5279..6394)
DNA (1116bp) protein (372aa)
Sodium:dicarboxylate symporter n=1 Tax=Clostridium sp. CAG:729 RepID=R7LNH7_9CLOT
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:CCY63489.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
sodium:dicarboxylate symporter
L3_072_000M1_scaffold_3096_6
Clostridium sp. CAG:967, Melainabacteria, Bacteria

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6625..8622
DNA (1998bp) protein (666aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
Ribonucleoside-diphosphate reductase n=1 Tax=Clostridium sp. CAG:967 RepID=R5K9U1_9CLOT
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CCY63488.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_3096_7
Clostridium sp. CAG:729, Melainabacteria, Bacteria

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9189..9713
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LMB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89236.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_3096_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

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9835..10575
DNA (741bp) protein (247aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Isoprenyl transferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HG79_9SPIR
UppS; undecaprenyl pyrophosphate synthase
L3_072_000M1_scaffold_3096_9
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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10593..11189
DNA (597bp) protein (199aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYR0_9BACL id=152726 bin=MEL_A1 species=Gemella haemolysans genus=Gemella taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=MEL_A1 organism_group=Melainabacteria
L3_072_000M1_scaffold_3096_10
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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11287..12474
DNA (1188bp) protein (396aa)
RND efflux transporter MFP subunit n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JAA3_9FUSO
RND efflux transporter MFP subunit {ECO:0000313|EMBL:CDE60859.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
RND family efflux transporter MFP subunit
L3_072_000M1_scaffold_3096_11
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

12558..15719
DNA (3162bp) protein (1054aa)
Multidrug efflux membrane fusion protein putative n=1 Tax=Clostridium sp. CAG:967 RepID=R5KQZ2_9CLOT
Multidrug efflux membrane fusion protein putative {ECO:0000313|EMBL:CCY63496.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
mexF; RND multidrug efflux transporter MexF
L3_072_000M1_scaffold_3096_12
Clostridium sp. CAG:729, Melainabacteria, Bacteria

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15723..17177
DNA (1455bp) protein (485aa)
Type I secretion outer membrane protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LMC6_9CLOT
Type I secretion outer membrane protein {ECO:0000313|EMBL:CDE89246.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
type I secretion outer membrane protein
L3_072_000M1_scaffold_3096_13
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

17320..17604
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LPK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89247.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_3096_14
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(17699..18499)
DNA (801bp) protein (267aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium sp. CAG:967 RepID=R5KQ41_9CLOT
inorganic polyphosphate/ATP-NAD kinase
Displaying 14 items

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