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L3_072_000M1_scaffold_2061

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2061_1
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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1..408
DNA (408bp) protein (136aa)
Short chain dehydrogenase n=1 Tax=Clostridium sp. CAG:768 RepID=R7HZS2_9CLOT
Short chain dehydrogenase {ECO:0000313|EMBL:CDE45194.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_072_000M1_scaffold_2061_2
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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483..848
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HV92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43171.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
ydeP; HTH-type transcriptional regulator YdeP
L3_072_000M1_scaffold_2061_3
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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912..1352
DNA (441bp) protein (147aa)
Iron (Metal) dependent repressor DtxR family n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J726_9FUSO
Iron (Metal) dependent repressor DtxR family {ECO:0000313|EMBL:CDE59551.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
DtxR family iron (metal) dependent repressor
L3_072_000M1_scaffold_2061_4
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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1463..2503
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J6J4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE59554.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_2061_5
Clostridium sp. CAG:729, Melainabacteria, Bacteria

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2592..3296
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LMS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88998.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_2061_6
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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comp(3369..4088)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HTY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43169.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
membrane-flanked domain-containing protein
L3_072_000M1_scaffold_2061_7
Clostridium sp. CAG:715, Melainabacteria, Bacteria

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4167..5096
DNA (930bp) protein (310aa)
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] id=153078 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
biotin synthase (EC:2.8.1.6)
L3_072_000M1_scaffold_2061_8
Clostridium sp. CAG:967, Melainabacteria, Bacteria

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5415..5897
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
ispDF; bifunctional enzyme IspD/IspF (2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase) (4-diphosphocytidyl-2c-methyl-d-erythritol synthase) (EC:2.7.7.60)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. CAG:967 RepID=R5K8K9_9CLOT
L3_072_000M1_scaffold_2061_9
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(5912..6358)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LII8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88569.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_2061_10
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

6432..7295
DNA (864bp) protein (288aa)
DHH family/DHHA1 domain protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J7H7_9FUSO
DHH family/DHHA1 domain protein {ECO:0000313|EMBL:CDE58827.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
exopolyphosphatase
L3_072_000M1_scaffold_2061_11
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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7299..8198
DNA (900bp) protein (300aa)
Putative integral inner membrane protein with ribonuclease fold n=1 Tax=Clostridium sp. CAG:768 RepID=R7HYD7_9CLOT
Putative integral inner membrane protein with ribonuclease fold {ECO:0000313|EMBL:CDE43227.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
yihY; YihY family inner membrane domain protein
L3_072_000M1_scaffold_2061_12
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(8209..8532)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:715 RepID=R5DM04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79814.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
L3_072_000M1_scaffold_2061_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(8584..9345)
DNA (762bp) protein (254aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2C9_9SPIR
Prephenate dehydrogenase {ECO:0000313|EMBL:CCY23613.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_2061_14
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

9525..11363
DNA (1839bp) protein (613aa)
Chaperone protein DnaK n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JE24_9FUSO
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
chaperone protein DnaK
L3_072_000M1_scaffold_2061_15
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(11419..12555)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HZV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE44905.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_072_000M1_scaffold_2061_16
unknown

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12724..12915
DNA (192bp) protein (64aa)

This feature has no annotations

L3_072_000M1_scaffold_2061_17
unknown

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12988..13293
DNA (306bp) protein (102aa)

This feature has no annotations

L3_072_000M1_scaffold_2061_18
unknown

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13373..13999
DNA (627bp) protein (209aa)

This feature has no annotations

L3_072_000M1_scaffold_2061_19
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14061..15524)
DNA (1464bp) protein (488aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H9P9_9SPIR
L3_072_000M1_scaffold_2061_20
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(15686..15964)
DNA (279bp) protein (93aa)
UPF0237 protein BN676_01499 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H9X4_9SPIR
UPF0237 protein BN676_01499 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
ACT domain protein
L3_072_000M1_scaffold_2061_21
Clostridium sp. CAG:813, Melainabacteria, Bacteria

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comp(15946..17523)
DNA (1578bp) protein (526aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. CAG:813 RepID=R7MEC6_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:CDE99010.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
alanine glycine permease
L3_072_000M1_scaffold_2061_22
Clostridium sp. CAG:967, Melainabacteria, Bacteria

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comp(17733..18644)
DNA (912bp) protein (304aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KAH1_9CLOT
beta-glucosidase-like protein
Displaying 22 items

View Taxonomy