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L3_072_000M1_scaffold_1044

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1044_1
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(2..1273)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LL19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89315.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_1044_2
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(1390..1809)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JDQ7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE61866.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_1044_3
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(1812..2888)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H4K7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24620.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_1044_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(3103..3486)
DNA (384bp) protein (128aa)
Ribosomal silencing factor RsfS n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H955_9SPIR
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
iojap-like protein
L3_072_000M1_scaffold_1044_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(3509..3943)
DNA (435bp) protein (145aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Sugar-phosphate isomerase RpiB/LacA/LacB family n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H535_9SPIR
Sugar-phosphate isomerase RpiB/LacA/LacB family {ECO:0000313|EMBL:CCY24618.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_1044_6
unknown

Not on your lists

comp(4071..4853)
DNA (783bp) protein (261aa)

This feature has no annotations

L3_072_000M1_scaffold_1044_7
unknown

Not on your lists

comp(4870..5784)
DNA (915bp) protein (305aa)

This feature has no annotations

L3_072_000M1_scaffold_1044_8
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(5951..8332)
DNA (2382bp) protein (794aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Clostridium sp. CAG:729 RepID=R7LI68_9CLOT
ATP-dependent DNA helicase {ECO:0000313|EMBL:CDE88360.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_1044_9
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(8360..9013)
DNA (654bp) protein (218aa)
Fimbrial protein (Pilin) n=1 Tax=Clostridium sp. CAG:768 RepID=R7I071_9CLOT
Fimbrial protein (Pilin) {ECO:0000313|EMBL:CDE44881.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_072_000M1_scaffold_1044_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(9184..11133)
DNA (1950bp) protein (650aa)
adenylate/guanylate cyclase (EC:4.6.1.1)
CHASE2 domain protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H952_9SPIR
CHASE2 domain protein {ECO:0000313|EMBL:CCY24614.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_1044_11
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

11182..11799
DNA (618bp) protein (206aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JD61_9FUSO
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CDE61760.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
L3_072_000M1_scaffold_1044_12
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

11792..12742
DNA (951bp) protein (317aa)
PfkB domain protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LLX3_9CLOT
PfkB domain protein {ECO:0000313|EMBL:CDE88357.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
PfkB domain-containing protein
L3_072_000M1_scaffold_1044_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

12735..13754
DNA (1020bp) protein (340aa)
Polysaccharide pyruvyl transferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HIS8_9SPIR
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CCY24611.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
polysaccharide pyruvyl transferase CsaB
L3_072_000M1_scaffold_1044_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13743..14618)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H4K0_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24610.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_1044_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14952..16229)
DNA (1278bp) protein (426aa)
Patatin n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H949_9SPIR
Patatin {ECO:0000313|EMBL:CCY24609.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
putative esterase of the alpha-beta hydrolase superfamily
L3_072_000M1_scaffold_1044_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(16259..16543)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HIG8_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24607.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_1044_17
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(16677..18632)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HUZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE42763.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_072_000M1_scaffold_1044_18
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(18731..19765)
DNA (1035bp) protein (345aa)
Orn/Lys/Arg decarboxylase major region n=1 Tax=Clostridium sp. CAG:715 RepID=R5DXN7_9CLOT
Orn/Lys/Arg decarboxylase major region {ECO:0000313|EMBL:CCX80746.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
LdcC; arginine/lysine/ornithine decarboxylase
L3_072_000M1_scaffold_1044_19
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(19776..20363)
DNA (588bp) protein (196aa)
Type IV pilus assembly protein PilZ n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H945_9SPIR
Type IV pilus assembly protein PilZ {ECO:0000313|EMBL:CCY24604.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_1044_20
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(20606..22411)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKJ4_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25342.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_1044_21
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(22411..23253)
DNA (843bp) protein (281aa)
Hopanoid biosynthesis associated protein HpnK n=1 Tax=Clostridium sp. CAG:729 RepID=R7LKT0_9CLOT
Hopanoid biosynthesis associated protein HpnK {ECO:0000313|EMBL:CDE88308.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hopanoid biosynthesis associated protein HpnK
L3_072_000M1_scaffold_1044_22
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

23321..24274
DNA (954bp) protein (318aa)
Putative bactoprenol glucosyl transferase-like protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LHU0_9CLOT
Putative bactoprenol glucosyl transferase-like protein {ECO:0000313|EMBL:CDE88309.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
glycosyl transferase 2 family protein
L3_072_000M1_scaffold_1044_23
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(24599..25375)
DNA (777bp) protein (259aa)
Type IV pilin PilE n=1 Tax=Clostridium sp. CAG:967 RepID=R5K8X4_9CLOT
Type IV pilin PilE {ECO:0000313|EMBL:CCY63178.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_1044_24
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

25457..25729
DNA (273bp) protein (91aa)
lambda repressor-like DNA-binding domains 6..85 id=161446 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Regulatory protein munI {ECO:0000313|EMBL:CDE88311.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_1044_25
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

25803..26192
DNA (390bp) protein (130aa)
Desulfoferrodoxin n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKZ7_9SPIR
Desulfoferrodoxin {ECO:0000313|EMBL:CCY25346.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
desulfoferrodoxin
L3_072_000M1_scaffold_1044_26
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

26185..26697
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
ferroxidase (EC:1.16.3.1)
Ferroxidase n=1 Tax=Clostridium sp. CAG:967 RepID=R5KMH8_9CLOT
L3_072_000M1_scaffold_1044_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26848..28434
DNA (1587bp) protein (529aa)
Two-component sensor histidine kinase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H775_9SPIR
Two-component sensor histidine kinase {ECO:0000313|EMBL:CCY25348.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
multi-sensor signal transduction histidine kinase
L3_072_000M1_scaffold_1044_28
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

28406..29092
DNA (687bp) protein (229aa)
LuxR family transcriptional regulator (EC:3.1.1.61)
Two component transcriptional regulator LuxR family n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JDM1_9FUSO
Two component transcriptional regulator LuxR family {ECO:0000313|EMBL:CDE61708.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_1044_29
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

29094..29729
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H6L1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25350.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Displaying 29 items

View Taxonomy