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L3_072_000M1_scaffold_346

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_346_1

Not on your lists

comp(1..1233)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E427_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE04292.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
calcium-binding protein
L3_072_000M1_scaffold_346_2
unknown

Not on your lists

comp(1235..2491)
DNA (1257bp) protein (419aa)

This feature has no annotations

L3_072_000M1_scaffold_346_3
unknown

Not on your lists

comp(2884..3456)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_072_000M1_scaffold_346_4
unknown

Not on your lists

comp(3472..4575)
DNA (1104bp) protein (368aa)

This feature has no annotations

L3_072_000M1_scaffold_346_5
unknown

Not on your lists

comp(4798..6069)
DNA (1272bp) protein (424aa)

This feature has no annotations

L3_072_000M1_scaffold_346_6
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(6152..7513)
DNA (1362bp) protein (454aa)
Outer membrane efflux protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JFQ3_9FUSO
Outer membrane efflux protein {ECO:0000313|EMBL:CDE62670.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
outer membrane efflux protein
L3_072_000M1_scaffold_346_7
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

7821..9449
DNA (1629bp) protein (543aa)
ABC transporter n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HFV3_9SPIR
ABC transporter {ECO:0000313|EMBL:CCY23596.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
ABC transporter, ATP-binding protein
L3_072_000M1_scaffold_346_8
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(9523..10635)
DNA (1113bp) protein (371aa)
inner-membrane transport permease ybhR; K09686 antibiotic transport system permease protein id=161917 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Putative transporter subunit: permease component of ABC superfamily {ECO:0000313|EMBL:CDE89429.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
ybhR; putative transporter subunit: permease component of ABC superfamily
L3_072_000M1_scaffold_346_9
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(10632..11741)
DNA (1110bp) protein (370aa)
ABC-2 type transporter n=1 Tax=Clostridium sp. CAG:729 RepID=R7LNY2_9CLOT
ABC-2 type transporter {ECO:0000313|EMBL:CDE89428.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
ABC transporter
L3_072_000M1_scaffold_346_10
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(11738..12823)
DNA (1086bp) protein (362aa)
Monosaccharide-transporting ATPase n=1 Tax=Clostridium sp. CAG:729 RepID=R7LPZ6_9CLOT
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:CDE89427.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
multidrug ABC transporter ATP-binding protein
L3_072_000M1_scaffold_346_11
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12949..13092)
DNA (144bp) protein (48aa)
Putative ATP-binding component of a transport system n=1 Tax=Clostridium sp. CAG:306 RepID=R6PTQ1_9CLOT
Putative ATP-binding component of a transport system {ECO:0000313|EMBL:CDC21871.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
ABC transporter, ATP-binding protein
L3_072_000M1_scaffold_346_12
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13073..13942)
DNA (870bp) protein (290aa)
HlyD family secretion protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H758_9SPIR
HlyD family secretion protein {ECO:0000313|EMBL:CCY23929.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
HlyD family transporter secretion protein
L3_072_000M1_scaffold_346_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13939..15255)
DNA (1317bp) protein (439aa)
RND efflux system outer membrane lipoprotein NodT family n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2L1_9SPIR
RND efflux system outer membrane lipoprotein NodT family {ECO:0000313|EMBL:CCY23930.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
NodT family RND efflux system outer membrane lipoprotein
L3_072_000M1_scaffold_346_14
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(15248..15874)
DNA (627bp) protein (209aa)
Regulatory protein TetR n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JDV8_9FUSO
Regulatory protein TetR {ECO:0000313|EMBL:CDE62119.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
transcriptional regulator, TetR family
L3_072_000M1_scaffold_346_15
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(15990..16463)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=E5BSP4_9FUSO id=470470 bin=MEL_C2 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ49775.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
L3_072_000M1_scaffold_346_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(16584..16889)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HLA2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25572.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_346_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

17045..17446
DNA (402bp) protein (134aa)
TspO and MBR like protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HLF7_9SPIR
TspO and MBR like protein {ECO:0000313|EMBL:CCY25637.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
TspO and MBR-like protein
L3_072_000M1_scaffold_346_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(17557..17730)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LX67_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92318.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
L3_072_000M1_scaffold_346_19
unknown

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17996..19099
DNA (1104bp) protein (368aa)

This feature has no annotations

L3_072_000M1_scaffold_346_20
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(19125..19769)
DNA (645bp) protein (215aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HBV8_9SPIR
ribulose-phosphate 3-epimerase
L3_072_000M1_scaffold_346_21
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(19757..20452)
DNA (696bp) protein (232aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Ribonuclease 3 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7Y4_9SPIR
ribonuclease 3
L3_072_000M1_scaffold_346_22
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(20453..21325)
DNA (873bp) protein (291aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Phosphatidate cytidylyltransferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HL99_9SPIR
CDP-diglyceride synthetase
L3_072_000M1_scaffold_346_23
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(21325..21891)
DNA (567bp) protein (189aa)
Ribosome-recycling factor n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JG08_9FUSO
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
ribosome recycling factor
L3_072_000M1_scaffold_346_24
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(21914..22642)
DNA (729bp) protein (243aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
pyrH; Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) (UMPK) (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7B0_9SPIR
L3_072_000M1_scaffold_346_25
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

22880..23068
DNA (189bp) protein (63aa)
Putative transcriptional regulator CopG family n=1 Tax=Clostridium sp. CAG:967 RepID=R5KPB2_9CLOT
Putative transcriptional regulator CopG family {ECO:0000313|EMBL:CCY62802.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
CopG family transcriptional regulator
L3_072_000M1_scaffold_346_26
unknown

Not on your lists

23065..23259
DNA (195bp) protein (65aa)

This feature has no annotations

L3_072_000M1_scaffold_346_27
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(23487..24221)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JHR4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE62442.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_346_28
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

24472..25602
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7Y1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25563.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
transcriptional regulator, GntR family
L3_072_000M1_scaffold_346_29
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(25849..26628)
DNA (780bp) protein (260aa)
transmembrane_regions 5..27 id=161776 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
General secretion pathway protein G {ECO:0000313|EMBL:CDE89002.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_346_30
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

26704..26961
DNA (258bp) protein (86aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:813 RepID=R7MCL2_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE97663.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Cro/CI family transcriptional regulator
Displaying items 1-30 of 86 in total

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