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L3_072_000M1_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_463_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(67..981)
DNA (915bp) protein (305aa)
L-serine dehydratase iron-sulfur-dependent alpha subunit n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5I8_9SPIR
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CCY24778.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L-serine dehydratase alpha subunit
L3_072_000M1_scaffold_463_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(983..1642)
DNA (660bp) protein (220aa)
sdaB; L-serine dehydratase beta subunit (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HIW4_9SPIR
L-serine ammonia-lyase {ECO:0000313|EMBL:CCY24777.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_463_3
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

1804..1944
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J9I2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE60599.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_463_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(2089..2931)
DNA (843bp) protein (281aa)
transmembrane_regions 13..35 id=161559 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE88760.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_463_5
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

3085..3423
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J9D3_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE59507.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
XRE family transcriptional regulator
L3_072_000M1_scaffold_463_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

4145..4936
DNA (792bp) protein (264aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
5'-nucleotidase (EC:3.1.3.5 3.1.3.6 3.6.1.11)
5'-nucleotidase SurE n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H4Y7_9SPIR
L3_072_000M1_scaffold_463_7
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

5129..5455
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HIT0_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24737.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_463_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5473..6054
DNA (582bp) protein (194aa)
DNA-3-methyladenine glycosylase I n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KC74_9FIRM
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EGN39526.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA-3-methyladenine glycosylase I
L3_072_000M1_scaffold_463_9
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(6578..7567)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KMX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62317.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
glycosyltransferase/CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L3_072_000M1_scaffold_463_10
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(7622..7831)
DNA (210bp) protein (70aa)
hypothetical protein id=152222 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
DNA-binding helix-turn-helix domain protein {ECO:0000313|EMBL:CCY62211.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_463_11
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

7917..8612
DNA (696bp) protein (232aa)
Genome sequencing data contig C327 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H462_9SPIR
Genome sequencing data contig C327 {ECO:0000313|EMBL:CCY24303.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_463_12
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(8626..9069)
DNA (444bp) protein (148aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJ80_9SPIR
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
flagellar basal-body rod protein FlgC
L3_072_000M1_scaffold_463_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(9118..9465)
DNA (348bp) protein (116aa)
Flagellar basal body rod protein FlgB n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H4Y2_9SPIR
Flagellar basal body rod protein FlgB {ECO:0000313|EMBL:CCY24770.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_463_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(9532..10245)
DNA (714bp) protein (238aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H9I4_9SPIR
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:CCY24769.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
flagellar basal-body rod protein FlgG
L3_072_000M1_scaffold_463_15
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(10263..10961)
DNA (699bp) protein (233aa)
flgF; flagellar basal-body rod protein; K02391 flagellar basal-body rod protein FlgF id=152498 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:CCX80486.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
flagellar basal body rod protein FlgF
L3_072_000M1_scaffold_463_16
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

11249..11590
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JH44_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE62212.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
membrane protein
L3_072_000M1_scaffold_463_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

11742..12755
DNA (1014bp) protein (338aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJD6_9SPIR
ribose-phosphate pyrophosphokinase
L3_072_000M1_scaffold_463_18
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12831..13967)
DNA (1137bp) protein (379aa)
Putative Metal-dependent hydrolase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PBW3_9CLOT
Putative Metal-dependent hydrolase {ECO:0000313|EMBL:CDC21788.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
L3_072_000M1_scaffold_463_19
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13964..15829)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2A4_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23588.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_463_20
unknown

Not on your lists

comp(16188..16502)
DNA (315bp) protein (105aa)

This feature has no annotations

L3_072_000M1_scaffold_463_21
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

17269..17955
DNA (687bp) protein (229aa)
Type IV pilin n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H6Z9_9SPIR
Type IV pilin {ECO:0000313|EMBL:CCY25273.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_463_22
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(18020..18733)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J829_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE59047.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_463_23
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(18767..19360)
DNA (594bp) protein (198aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
methyltransferase GidB (EC:2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J5K2_9FUSO
L3_072_000M1_scaffold_463_24
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(19350..21743)
DNA (2394bp) protein (798aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5K5P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62065.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_463_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

21851..21955
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LUQ7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91488.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
L3_072_000M1_scaffold_463_26
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

21964..23088
DNA (1125bp) protein (375aa)
Glr0790 protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2Z5_9SPIR
Glr0790 protein {ECO:0000313|EMBL:CCY24035.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
peptidase M23
L3_072_000M1_scaffold_463_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

23140..25410
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HH57_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24036.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_463_28
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

25412..26035
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=2 Tax=Providencia stuartii RepID=B2PVQ3_PROST id=161388 bin=MEL_C1 species=Providencia stuartii genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=MEL_C1 organism_group=Melainabacteria
Class II aldolase/adducin family protein {ECO:0000313|EMBL:CDE88646.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
class II aldolase/adducin-like protein
L3_072_000M1_scaffold_463_29
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26073..26894
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H3L2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24038.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_463_30
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

26891..28021
DNA (1131bp) protein (377aa)
Lipid-A-disaccharide synthase n=1 Tax=Clostridium sp. CAG:729 RepID=R7LLR4_9CLOT
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:CDE88648.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
lipid-A-disaccharide synthase
Displaying items 1-30 of 50 in total

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