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L3_072_000M1_scaffold_595

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_595_1
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

1..639
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KAH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY63725.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_595_2
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(657..1037)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JCQ8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE61531.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_595_3
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

1168..2124
DNA (957bp) protein (319aa)
DNA polymerase III delta subunit n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5D5_9SPIR
DNA polymerase III delta subunit {ECO:0000313|EMBL:CCY24905.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
DNA polymerase III subunit delta
L3_072_000M1_scaffold_595_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

2108..2977
DNA (870bp) protein (290aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LMJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88918.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_595_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

3058..3771
DNA (714bp) protein (238aa)
Two component transcriptional regulator winged helix family n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H283_9SPIR
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCY23568.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
phoP; two-component response regulator
L3_072_000M1_scaffold_595_6
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

3775..5466
DNA (1692bp) protein (564aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
GAF sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:967 RepID=R5KNM7_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_072_000M1_scaffold_595_7
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

5450..5872
DNA (423bp) protein (141aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Zinc-binding CMP/dCMP deaminase n=1 Tax=Clostridium sp. CAG:729 RepID=R7LH08_9CLOT
cytosine/adenosine deaminase
L3_072_000M1_scaffold_595_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

5869..6657
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H1P3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23565.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_595_9
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

6848..7156
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KNQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62567.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_595_10
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(7159..7401)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KN93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62566.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
L3_072_000M1_scaffold_595_11
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(7642..9324)
DNA (1683bp) protein (561aa)
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Diphosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HGC9_9SPIR
Diphosphate--fructose-6-phosphate 1-phosphotransferase {ECO:0000313|EMBL:CCY23872.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_595_12
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

9636..10892
DNA (1257bp) protein (419aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ82448.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
L3_072_000M1_scaffold_595_13
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

10907..11581
DNA (675bp) protein (225aa)
Multimeric flavodoxin WrbA family protein {ECO:0000313|EMBL:KKQ82446.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
L3_072_000M1_scaffold_595_14
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(11937..13313)
DNA (1377bp) protein (459aa)
Phosphoglucosamine mutase n=1 Tax=Clostridium sp. CAG:967 RepID=R5KLY7_9CLOT
Phosphoglucosamine mutase {ECO:0000313|EMBL:CCY62096.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
phosphoglucomutase/phosphomannomutase
L3_072_000M1_scaffold_595_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

13376..14221
DNA (846bp) protein (282aa)
Chorismate mutase prephenate dehydratase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJR8_9SPIR
Chorismate mutase prephenate dehydratase {ECO:0000313|EMBL:CCY25032.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
prephenate dehydratase
L3_072_000M1_scaffold_595_16
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

14311..15078
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KAR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62099.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_072_000M1_scaffold_595_17
unknown

Not on your lists

15110..15640
DNA (531bp) protein (177aa)

This feature has no annotations

L3_072_000M1_scaffold_595_18
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(15741..15995)
DNA (255bp) protein (85aa)
Helix-turn-helix DNA-binding protein XRE family n=1 Tax=Clostridium sp. CAG:768 RepID=R7HU75_9CLOT
Helix-turn-helix DNA-binding protein XRE family {ECO:0000313|EMBL:CDE43234.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
XRE family transcriptional regulator
L3_072_000M1_scaffold_595_19
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

16163..17386
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HK27_9SPIR
L3_072_000M1_scaffold_595_20
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

17434..18084
DNA (651bp) protein (217aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJS2_9SPIR
L3_072_000M1_scaffold_595_21
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

18204..18404
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HZI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE44368.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_072_000M1_scaffold_595_22
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

18422..19387
DNA (966bp) protein (322aa)
hypothetical protein id=162943 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:CDE88833.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Alcohol dehydrogenase GroES domain protein
L3_072_000M1_scaffold_595_23
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

19411..20532
DNA (1122bp) protein (374aa)
Ycf84 protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HK31_9SPIR
Ycf84 protein {ECO:0000313|EMBL:CCY25041.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
YjgP/YjgQ permease
L3_072_000M1_scaffold_595_24
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

20575..21147
DNA (573bp) protein (191aa)
coiled-coil 66..94 id=162888 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE88836.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_595_25
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

21215..21745
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5U1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25030.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_595_26
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

21859..23589
DNA (1731bp) protein (577aa)
Metal dependent phosphohydrolase with GAF sensor n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J728_9FUSO
Metal dependent phosphohydrolase with GAF sensor {ECO:0000313|EMBL:CDE59719.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
HD/GAF domain-containing response regulator
L3_072_000M1_scaffold_595_27
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

23602..25143
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5K5Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62090.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
L3_072_000M1_scaffold_595_28
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

25140..25787
DNA (648bp) protein (216aa)
Two component transcriptional regulator LuxR family n=1 Tax=Clostridium sp. CAG:768 RepID=R7HZG5_9CLOT
Two component transcriptional regulator LuxR family {ECO:0000313|EMBL:CDE44338.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
two component transcriptional regulator, LuxR family
L3_072_000M1_scaffold_595_29
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

25798..26427
DNA (630bp) protein (210aa)
Two component transcriptional regulator LuxR family n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5T6_9SPIR
Two component transcriptional regulator LuxR family {ECO:0000313|EMBL:CCY25025.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
two-component response regulator
L3_072_000M1_scaffold_595_30
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26454..26984
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HAD3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25024.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
pentapeptide repeat-containing protein
Displaying items 1-30 of 47 in total

View Taxonomy