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L3_072_000M1_scaffold_745

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_745_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7J7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24029.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_745_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

315..1427
DNA (1113bp) protein (371aa)
Serine/threonine protein kinase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HI37_9SPIR
Serine/threonine protein kinase {ECO:0000313|EMBL:CCY24381.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
TPR domain protein, putative component of TonB system
L3_072_000M1_scaffold_745_3
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(1417..2256)
DNA (840bp) protein (280aa)
ABC-type transporter integral membrane subunit n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JG91_9FUSO
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CDE61902.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
lactose ABC transporter permease
L3_072_000M1_scaffold_745_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(2253..3125)
DNA (873bp) protein (291aa)
ABC transporter permease protein putative n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H8E4_9SPIR
ABC transporter permease protein putative {ECO:0000313|EMBL:CCY24379.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
lactose ABC transporter permease
L3_072_000M1_scaffold_745_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(3183..3404)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKS4_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25281.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
regulatory protein
L3_072_000M1_scaffold_745_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

3602..6685
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HLB7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25456.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_745_7
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

6958..8484
DNA (1527bp) protein (509aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium sp. CAG:768 RepID=R7I0K0_9CLOT
L3_072_000M1_scaffold_745_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

8575..11544
DNA (2970bp) protein (990aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H705_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25278.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_745_9
unknown

Not on your lists

11611..12081
DNA (471bp) protein (157aa)

This feature has no annotations

L3_072_000M1_scaffold_745_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(12074..12688)
DNA (615bp) protein (205aa)
General secretion pathway protein G n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H6V2_9SPIR
General secretion pathway protein G {ECO:0000313|EMBL:CCY25213.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_745_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

12774..13013
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LV04_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91891.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
putative transcription factor, MBF1 like protein
L3_072_000M1_scaffold_745_12
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

13119..13292
DNA (174bp) protein (58aa)
seg 42..57 id=471147 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
rpsU; 30S ribosomal protein S21 RpsU
L3_072_000M1_scaffold_745_13
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

13392..14561
DNA (1170bp) protein (390aa)
FolC bifunctional protein n=1 Tax=Clostridium sp. CAG:715 RepID=R5DG05_9CLOT
FolC bifunctional protein {ECO:0000313|EMBL:CCX79123.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
FolC bifunctional protein
L3_072_000M1_scaffold_745_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14539..16101)
DNA (1563bp) protein (521aa)
Glycosyltransferase group 2 family protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H3J9_9SPIR
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCY24018.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
glycosyl transferase family protein
L3_072_000M1_scaffold_745_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(16237..16995)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7I8_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24019.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_072_000M1_scaffold_745_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

17148..17828
DNA (681bp) protein (227aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2Y3_9SPIR
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CCY24020.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
trypsin-like serine protease with C-terminal PDZ domain
L3_072_000M1_scaffold_745_17
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

17928..18842
DNA (915bp) protein (305aa)
Branched-chain amino acid aminotransferase n=1 Tax=Clostridium sp. CAG:967 RepID=R5KB66_9CLOT
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CCY63975.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
branched-chain amino acid aminotransferase
L3_072_000M1_scaffold_745_18
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

18945..19679
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H3K0_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24023.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
ABC transport system permease protein
L3_072_000M1_scaffold_745_19
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(19831..20907)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KR50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY63566.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
L3_072_000M1_scaffold_745_20
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

21045..21791
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:729 RepID=R7LLS2_9CLOT
hypothetical protein
L3_072_000M1_scaffold_745_21
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

21763..23166
DNA (1404bp) protein (468aa)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:768 RepID=R7HXQ8_9CLOT
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE44056.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
poly A polymerase
L3_072_000M1_scaffold_745_22
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

23464..25239
DNA (1776bp) protein (592aa)
seg 519..544 id=161344 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE88279.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
L3_072_000M1_scaffold_745_23
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

25252..26898
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JCH7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE61565.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_745_24
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(26916..27848)
DNA (933bp) protein (311aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JFB6_9FUSO
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
L3_072_000M1_scaffold_745_25
unknown

Not on your lists

comp(27826..28077)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_072_000M1_scaffold_745_26
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(28089..29600)
DNA (1512bp) protein (504aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKE5_9SPIR
L3_072_000M1_scaffold_745_27
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(29611..30156)
DNA (546bp) protein (182aa)
ATP synthase subunit delta n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JD78_9FUSO
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
ATP synthase F1 subunit delta
L3_072_000M1_scaffold_745_28
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(30153..30665)
DNA (513bp) protein (171aa)
ATP synthase subunit b n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JCW1_9FUSO
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
ATP synthase F0 subunit B
L3_072_000M1_scaffold_745_29
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(30667..31134)
DNA (468bp) protein (156aa)
atpF; ATP synthase F0F1 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Clostridium sp. CAG:715 RepID=R5DJ86_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
L3_072_000M1_scaffold_745_30
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(31160..31396)
DNA (237bp) protein (79aa)
ATP synthase subunit C (EC:3.6.3.14)
ATP synthase F0 C subunit n=2 Tax=Bacteria RepID=R5DWD0_9CLOT
ATP synthase F0 C subunit {ECO:0000313|EMBL:CCX80301.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Displaying items 1-30 of 55 in total

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