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L3_072_000M1_scaffold_346_34

Organism: dasL3_072_000M1_concoct_6_fa

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(28775..29674)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=162539 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 288.0
  • Bit_score: 379
  • Evalue 2.30e-102
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 288.0
  • Bit_score: 376
  • Evalue 2.70e-101
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 290.0
  • Bit_score: 233
  • Evalue 7.50e-59

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Taxonomy

Clostridium sp. CAG:729 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGAATTCGGAGTGTTCGGCGGTTAAAGGTGCAGAAAAACTCCCGCTGTTCGGATTTTTGAATGTTTATAAACCGCAAGGTTTAACAAGCCATGATGTTGTTGCGAGAATGCGCCGTGTCATAAAAATTAAGCAAATCGGCCACACCGGAACGCTTGACCCGTTTGCAGAAGGCGTTTTGCCGGTCTGTATCGGCAAATCTACGCGTCTGATTGAATATTTGGCTGATGATAAAGAATATCTGGCTTTTGTAAAGTTCGGAATTGAAACAGACACCTACGACCTTGAGGGTGAAGTTGCGGCGGTCTCTGACAAAAAGGTTTTGGAAGCTGAAATATCCGAACAGCTTAAAAATTTTCTCGGCGAAATTTCCCAGATGCCGCCGATTTATTCTGCAATAAAAGTCAAAGGTAAAAAATTATACGAATACGCCCGCGAAGGAAAAGAAGTTGAAATTCAGCCGCGAAAGGTTACGATTGAGAAAATTGAACTTAAAAACTTCGATTTTGCTTCTCAGACTGCCGAAATTCTGATTAAATGCTCTAAAGGCACTTACATCCGCTCAATTGCGCATGATTTGGGTAAAAATCTCGGCTGCGGCGCGCATTTGGTGAAATTAATCCGGACTCAGGCAGGCAGTTTTTTTGTAAAAAACTCAATTCCGCTGGAAAACTTTGAAACTCCGGAAATTGTACGTGAAAATTTGATTAATCCTGTTAAAATGCTTGATTATCCAAAAATAATTGTAGGCGATGATGAGCATGCCAAAATTCAAAACGGAGTTGCAATCGCCAATAACGGCCTTGCTTCGGGCAAAGTTGTAATTTTAATTTATAATGATATAATAAATGCAGTCGGACTGACCGACGGCAAAAAAATCTTAATTAAGAAAGTGTTCTGA
PROTEIN sequence
Length: 300
VNSECSAVKGAEKLPLFGFLNVYKPQGLTSHDVVARMRRVIKIKQIGHTGTLDPFAEGVLPVCIGKSTRLIEYLADDKEYLAFVKFGIETDTYDLEGEVAAVSDKKVLEAEISEQLKNFLGEISQMPPIYSAIKVKGKKLYEYAREGKEVEIQPRKVTIEKIELKNFDFASQTAEILIKCSKGTYIRSIAHDLGKNLGCGAHLVKLIRTQAGSFFVKNSIPLENFETPEIVRENLINPVKMLDYPKIIVGDDEHAKIQNGVAIANNGLASGKVVILIYNDIINAVGLTDGKKILIKKVF*