ggKbase home page

L3_072_000M1_scaffold_912_27

Organism: dasL3_072_000M1_concoct_6_fa

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(29620..31329)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 569.0
  • Bit_score: 1111
  • Evalue 0.0
rpoC1; DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 605.0
  • Bit_score: 797
  • Evalue 1.50e-228
DNA-directed RNA polymerase n=1 Tax=Clostridium sp. CAG:768 RepID=R7HX49_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 569.0
  • Bit_score: 1111
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:768 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 1710
ATGTCAACAAGTATTGATTATTTTGACTATATACGAATAAGTATAGCGTCGCCGGAAAGGATTTTGAAATGGTCCTACGGTGAGGTTACCAAACCTGAAACAATTAACTACCGTACATTAAAACCCGAACGTGACGGTCTTTTCTGCGAAAGAATTTTTGGGCCTTCAAAAGACTGGGAATGCTATTGCGGTAAATATAAAAGAGTTCGCCACAAAGGTATTATCTGCGAACGCTGCGGTGTTGAAGTTACAGATTCAAAAGTAAGACGTCAGAGAATGGGACACATCAAACTGGCGGCTCCTGTTTCTCACATCTGGTTTTTGAAAGGAATTCCTTCATACCTCGGCTTATTGCTCGATATGACTTTGAAAGATCTTGAACAGGTTATTTATTTTAACAACTACGTAGTTCTTGATCCGGGCGAAAGCCAATTCAAAAAACTTCAGCTTTTAGGCGAAGAAGAATATGAAGATTATATGGCTGAAAACGAAGATTCTACTTTAAAAGTAGGCATCGGTGCAGAAGCTATTAAAGAATTATTATCAGAAATTAATACAAAAGAACTTGCAGAAGAAATCAGAACAGAACTTGCAGGTTCAGTAAATTCAGTTCAAAAGAAAAGCAAACTTATCAAACGTTTAAGACTGCTTGACAGCTTGATTTCATCAGAAACAGATCCGACCTGGATGATTATGGATGTGTTGCCTGTAACTCCTCCGGATTTGAGACCGATGGTTCAATTAGACGGCGGGCGTTTTGCAACTTCTGACTTGAACGATTTGTACAGACGTGTTATTAACAGAAACAACCGTTTACAAAGACTTTTGGAAATGGGCGCTCCTGAAATCATTGTTCGTAACGAAAAACGTATGCTGCAAGAAGCTGTAGATGCTCTAATTGACAACGGCAGACGCGGCAGAACAGTTGTCGGCCCGAACAACAGAGCATTAAAATCACTTTCTAATATTATCGAAGGTAAACAGGGCCGTTTCCGTCAGAACCTGCTCGGTAAACGTGTTGACTACTCAGGACGTTCAGTTATCGTGGTAGGCCCGCAATTGAGCTTAAATCAATGCGGTTTGCCGAAAGAAATGGCAATCGAATTGTTCAAACCGTTTGTTGTTAACAAACTTATTGAACGCGGATATGTTCAAAACATTAAATCAGCTAAGAAGAAAATCGAGCGCTCAGAAGCAATCGTTTGGGATATCCTTGAAGAAGTAATCGACGGACATCCGGTATTGTTAAACCGTGCCCCGACTCTTCACAGACTCGGTATTCAGGCGTTTGAACCGAAATTGGTAGAAGGCCGCGCAATTCAGCTTCACCCGCTTGTTTGTACAGCATTCAACGCTGACTTCGACGGCGACCAGATGGCTGTTCACGTTCCGCTTTCAATTGAAGCTCAAACCGAAGCACGTATGTTGATGTTAGCAACTAATAACATTCTTGCACCGGCTACTGGTAAACCGATTATTACACCAACTCAGGATATGGTTTTGGGTATGTATTATCTGACAATCCTGAAAAATCCGGAAATGGAGCCTAAAGGTTATTTCTACAACTTCCAGGACGCAATTTCCGCTCTTGAAGTCGGAGTAATTGAACTTCACGACAAAATCGTTGTAAGAGATGAACACGGCGGAAGGTTAGAAACTACAGCAGGAAGATTAATCTTCAACGAAGCTGTAAGAAAAGCCCTGGTTTAA
PROTEIN sequence
Length: 570
MSTSIDYFDYIRISIASPERILKWSYGEVTKPETINYRTLKPERDGLFCERIFGPSKDWECYCGKYKRVRHKGIICERCGVEVTDSKVRRQRMGHIKLAAPVSHIWFLKGIPSYLGLLLDMTLKDLEQVIYFNNYVVLDPGESQFKKLQLLGEEEYEDYMAENEDSTLKVGIGAEAIKELLSEINTKELAEEIRTELAGSVNSVQKKSKLIKRLRLLDSLISSETDPTWMIMDVLPVTPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLQRLLEMGAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGPNNRALKSLSNIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPQLSLNQCGLPKEMAIELFKPFVVNKLIERGYVQNIKSAKKKIERSEAIVWDILEEVIDGHPVLLNRAPTLHRLGIQAFEPKLVEGRAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQTEARMLMLATNNILAPATGKPIITPTQDMVLGMYYLTILKNPEMEPKGYFYNFQDAISALEVGVIELHDKIVVRDEHGGRLETTAGRLIFNEAVRKALV*