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L3_072_000M1_scaffold_912

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_912_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

390..1844
DNA (1455bp) protein (485aa)
Type I secretion outer membrane protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H6P9_9SPIR
Type I secretion outer membrane protein {ECO:0000313|EMBL:CCY23774.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
outer membrane efflux protein
L3_072_000M1_scaffold_912_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

1844..3019
DNA (1176bp) protein (392aa)
Efflux transporter RND family MFP subunit n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2S8_9SPIR
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCY23773.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
RND family efflux transporter, MFP subunit
L3_072_000M1_scaffold_912_3
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

3046..3750
DNA (705bp) protein (235aa)
ABC transporter related n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J4N5_9FUSO
ABC transporter related {ECO:0000313|EMBL:CDE58775.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_912_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

3873..5102
DNA (1230bp) protein (410aa)
Export ABC transporter permease protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HGB3_9SPIR
Export ABC transporter permease protein {ECO:0000313|EMBL:CCY23771.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
export ABC transporter permease
L3_072_000M1_scaffold_912_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(5105..5317)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKQ2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25397.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_912_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

5446..6225
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HL43_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25396.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_912_7
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(6316..9489)
DNA (3174bp) protein (1058aa)
SNF2/helicase domain protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HBA3_9SPIR
SNF2/helicase domain protein {ECO:0000313|EMBL:CCY25394.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
SNF2-related protein
L3_072_000M1_scaffold_912_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(9604..10062)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7D2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25393.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
integral membrane protein
L3_072_000M1_scaffold_912_9
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

10288..10845
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H500_9SPIR
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
translation elongation factor P
L3_072_000M1_scaffold_912_10
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

10942..11388
DNA (447bp) protein (149aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HVX1_9CLOT
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:CDE43520.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
biotin carboxyl carrier protein
L3_072_000M1_scaffold_912_11
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

11453..12805
DNA (1353bp) protein (451aa)
accC; biotin carboxylase (EC:6.3.4.14)
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H4H3_9SPIR
Acetyl-CoA carboxylase biotin carboxylase {ECO:0000313|EMBL:CCY24575.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_072_000M1_scaffold_912_12
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(12994..14154)
DNA (1161bp) protein (387aa)
hypothetical protein id=470571 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ50981.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
L3_072_000M1_scaffold_912_13
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

14267..15598
DNA (1332bp) protein (444aa)
Putative multidrug resistance protein NorM (Na(+)/drug antiporter) n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J8C3_9FUSO
Putative multidrug resistance protein NorM (Na(+)/drug antiporter) {ECO:0000313|EMBL:CDE60115.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
norM; putative multidrug resistance protein NorM (Na(+)/drug antiporter)
L3_072_000M1_scaffold_912_14
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

15643..17034
DNA (1392bp) protein (464aa)
Putative membrane protein/domain n=1 Tax=Clostridium sp. CAG:729 RepID=R7LLE8_9CLOT
Putative membrane protein/domain {ECO:0000313|EMBL:CDE88172.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
RDD domain-containing protein
L3_072_000M1_scaffold_912_15
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

17091..17564
DNA (474bp) protein (158aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Nucleoside diphosphate kinase n=1 Tax=Clostridium sp. CAG:729 RepID=R7LHG8_9CLOT
ndk; nucleoside diphosphate kinase
L3_072_000M1_scaffold_912_16
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

17622..18749
DNA (1128bp) protein (376aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Clostridium sp. CAG:768 RepID=R7HW90_9CLOT
L3_072_000M1_scaffold_912_17
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(18952..19878)
DNA (927bp) protein (309aa)
PSP1 C-terminal domain protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J8A2_9FUSO
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDE60095.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
yaaT; Stage 0 sporulation protein YaaT
L3_072_000M1_scaffold_912_18
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(19880..20881)
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
glycerol 3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. CAG:768 RepID=R7HWA1_9CLOT
L3_072_000M1_scaffold_912_19
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(20935..21831)
DNA (897bp) protein (299aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J900_9FUSO
RpiR family transcriptional regulator
L3_072_000M1_scaffold_912_20
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(21883..22341)
DNA (459bp) protein (153aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9 2.5.1.-); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=152952 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9 2.5.1.-)
L3_072_000M1_scaffold_912_21
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(22418..23122)
DNA (705bp) protein (235aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Clostridium sp. CAG:967 RepID=R5K789_9CLOT
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:CCY62635.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
cytochrome c biogenesis protein transmembrane region
L3_072_000M1_scaffold_912_22
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(23122..23547)
DNA (426bp) protein (142aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:715 RepID=R5DPW5_9CLOT
Thioredoxin {ECO:0000313|EMBL:CCX80844.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
L3_072_000M1_scaffold_912_23
unknown

Not on your lists

comp(23625..24077)
DNA (453bp) protein (151aa)

This feature has no annotations

L3_072_000M1_scaffold_912_24
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(24152..24316)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HW04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43550.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_072_000M1_scaffold_912_25
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(24403..25560)
DNA (1158bp) protein (386aa)
hypothetical protein id=470571 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ50981.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
L3_072_000M1_scaffold_912_26
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(25701..29558)
DNA (3858bp) protein (1286aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
rpoC2; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Clostridium sp. CAG:715 RepID=R5DVZ4_9CLOT
L3_072_000M1_scaffold_912_27
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(29620..31329)
DNA (1710bp) protein (570aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
rpoC1; DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Clostridium sp. CAG:768 RepID=R7HX49_9CLOT
L3_072_000M1_scaffold_912_28
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(31404..32180)
DNA (777bp) protein (259aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H7L8_9SPIR
L3_072_000M1_scaffold_912_29
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(32147..34714)
DNA (2568bp) protein (856aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:729 RepID=R7LLG9_9CLOT
L3_072_000M1_scaffold_912_30
unknown

Not on your lists

35108..35722
DNA (615bp) protein (205aa)

This feature has no annotations

Displaying items 1-30 of 49 in total

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