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L3_072_000M1_scaffold_2112

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2112_1
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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357..1013
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JWF2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB54397.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
L3_072_000M1_scaffold_2112_2
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(1267..1782)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R669_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30146.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_2112_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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1914..2555
DNA (642bp) protein (214aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QN25_9PROT
L3_072_000M1_scaffold_2112_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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2609..3307
DNA (699bp) protein (233aa)
Two component transcriptional regulator winged helix family n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUY9_9PROT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCZ30144.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
two component transcriptional regulator
L3_072_000M1_scaffold_2112_5
unknown

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comp(3317..3514)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_072_000M1_scaffold_2112_6
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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4101..5225
DNA (1125bp) protein (375aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QR37_9PROT
L3_072_000M1_scaffold_2112_7
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5241..6182
DNA (942bp) protein (314aa)
Staphylococcus haemolyticus JCSC1435 DNA complete genome n=1 Tax=Azospirillum sp. CAG:239 RepID=R6ITP1_9PROT
Staphylococcus haemolyticus JCSC1435 DNA complete genome {ECO:0000313|EMBL:CDB52640.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
hypothetical protein
L3_072_000M1_scaffold_2112_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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6244..7395
DNA (1152bp) protein (384aa)
Major facilitator superfamily MFS_1 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QR34_9PROT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCZ31190.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
major facilitator superfamily transporter
L3_072_000M1_scaffold_2112_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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7444..8670
DNA (1227bp) protein (409aa)
Transporter gate domain protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QRA7_9PROT
Transporter gate domain protein {ECO:0000313|EMBL:CCZ31188.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
nucleoside recognition domain-containing protein
L3_072_000M1_scaffold_2112_10
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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8726..9190
DNA (465bp) protein (155aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R920_9PROT
D-tyrosyl-tRNA(Tyr) deacylase
L3_072_000M1_scaffold_2112_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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9180..9953
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QR28_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31185.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_2112_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(9957..11000)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QXH8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31184.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_2112_13
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(11000..11689)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QRA3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31183.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_2112_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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11844..12281
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RE41_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31182.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_2112_15
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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12296..14065
DNA (1770bp) protein (590aa)
Phospholipid-lipopolysaccharide ABC transporter n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R916_9PROT
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:CCZ31181.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
ABC transporter
L3_072_000M1_scaffold_2112_16
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(14055..14624)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QR26_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31180.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
conserved protein of unknown function; putative Smr and MutS2 domains
L3_072_000M1_scaffold_2112_17
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(14611..15099)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QXH4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31179.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_2112_18
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(15099..16244)
DNA (1146bp) protein (382aa)
Membrane-bound lytic murein transglycosylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QRA0_9PROT
Membrane-bound lytic murein transglycosylase {ECO:0000313|EMBL:CCZ31178.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_2112_19
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(16244..16912)
DNA (669bp) protein (223aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RE37_9PROT
Import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:CCZ31177.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
conserved protein of unknown function(similar to Mitochondrial inner membrane translocase complex, subunit Tim44)
L3_072_000M1_scaffold_2112_20
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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17055..17522
DNA (468bp) protein (156aa)
Protein-export protein SecB n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R912_9PROT
Protein-export protein SecB {ECO:0000313|EMBL:CCZ31176.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
preprotein translocase subunit SecB
L3_072_000M1_scaffold_2112_21
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(17568..18191)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QX68_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31009.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_2112_22
unknown

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comp(18217..18327)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 22 items

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