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L3_072_000M1_scaffold_1621

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1621_1
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..816
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J5U7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB53176.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
L3_072_000M1_scaffold_1621_2
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(1233..1559)
DNA (327bp) protein (109aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R4W1_9PROT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
flagellar hook-basal body protein FliE
L3_072_000M1_scaffold_1621_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(1572..1985)
DNA (414bp) protein (138aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QLR9_9PROT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
flgC; flagellar basal body rod protein FlgC
L3_072_000M1_scaffold_1621_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(1997..2392)
DNA (396bp) protein (132aa)
Flagellar basal body protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTJ1_9PROT
Flagellar basal body protein {ECO:0000313|EMBL:CCZ29689.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
flgB; flagellar basal-body rod protein FlgB
L3_072_000M1_scaffold_1621_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

2526..2849
DNA (324bp) protein (108aa)
Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM26_9PROT
Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB {ECO:0000313|EMBL:CCZ29688.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
flagellar biosynthetic protein FlhB
L3_072_000M1_scaffold_1621_6
unknown

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3314..3553
DNA (240bp) protein (80aa)

This feature has no annotations

L3_072_000M1_scaffold_1621_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(3693..4907)
DNA (1215bp) protein (405aa)
tRNA/rRNA cytosine-C5-methylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R9S5_9PROT
tRNA/rRNA cytosine-C5-methylase {ECO:0000313|EMBL:CCZ29687.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_1621_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(5090..5797)
DNA (708bp) protein (236aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTI5_9PROT
23S rRNA methylase
L3_072_000M1_scaffold_1621_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(5772..6737)
DNA (966bp) protein (322aa)
Exopolyphosphatase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM21_9PROT
Exopolyphosphatase {ECO:0000313|EMBL:CCZ29683.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
exopolyphosphatase
L3_072_000M1_scaffold_1621_10
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(6730..7860)
DNA (1131bp) protein (377aa)
Exopolyphosphatase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R9S3_9PROT
Exopolyphosphatase {ECO:0000313|EMBL:CCZ29682.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Ppx/GppA phosphatase
L3_072_000M1_scaffold_1621_11
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8003..9094)
DNA (1092bp) protein (364aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
Modification methylase CcrmI n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J535_9PROT
modification methylase CcrMI
L3_072_000M1_scaffold_1621_12
unknown

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comp(9241..9597)
DNA (357bp) protein (119aa)

This feature has no annotations

L3_072_000M1_scaffold_1621_13
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(9678..10310)
DNA (633bp) protein (211aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rnhB; Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM14_9PROT
L3_072_000M1_scaffold_1621_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(10419..11399)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RCP3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30612.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
LD-carboxypeptidase family protein
L3_072_000M1_scaffold_1621_15
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

11520..12704
DNA (1185bp) protein (395aa)
Sodium/hydrogen exchanger n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R7J0_9PROT
Sodium/hydrogen exchanger {ECO:0000313|EMBL:CCZ30616.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
sodium/hydrogen exchanger
L3_072_000M1_scaffold_1621_16
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

12701..13291
DNA (591bp) protein (197aa)
Probable phosphoglycerate mutase GpmB n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RCP7_9PROT
Probable phosphoglycerate mutase GpmB {ECO:0000313|EMBL:CCZ30617.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
phosphatase PhoE
L3_072_000M1_scaffold_1621_17
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(13293..13496)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPI1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30620.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_1621_18
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

13571..15088
DNA (1518bp) protein (506aa)
PIF1 helicase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R7J5_9PROT
PIF1 helicase {ECO:0000313|EMBL:CCZ30621.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
PIF1 helicase
L3_072_000M1_scaffold_1621_19
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

15142..15390
DNA (249bp) protein (83aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YKA1_9FIRM
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:CDD28966.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_072_000M1_scaffold_1621_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15448..16866
DNA (1419bp) protein (473aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium sp. CAG:505 RepID=R7BCH8_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:CDD62486.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
iron-only hydrogenase maturation protein HydG
L3_072_000M1_scaffold_1621_21
unknown

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17088..17519
DNA (432bp) protein (144aa)

This feature has no annotations

L3_072_000M1_scaffold_1621_22
unknown

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17555..18043
DNA (489bp) protein (163aa)

This feature has no annotations

L3_072_000M1_scaffold_1621_23
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(18066..18734)
DNA (669bp) protein (223aa)
yieH; phosphatase (EC:3.1.3.-)
Haloacid dehalogenase superfamily protein subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QXL4_9PROT
Haloacid dehalogenase superfamily protein subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCZ31229.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_1621_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(19192..20490)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPJ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30630.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
udg; Putative UDP-glucose 6-dehydrogenase
L3_072_000M1_scaffold_1621_25
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20646..21131
DNA (486bp) protein (162aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
Phosphatidylglycerophosphatase A and related protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J595_9PROT
Phosphatidylglycerophosphatase A and related protein
L3_072_000M1_scaffold_1621_26
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21195..21956
DNA (762bp) protein (254aa)
Phospholipid-lipopolysaccharide ABC transporter n=1 Tax=Azospirillum sp. CAG:239 RepID=R6IRB9_9PROT
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:CDB52903.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
ABC transporter
L3_072_000M1_scaffold_1621_27
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22013..22885
DNA (873bp) protein (291aa)
Phospholipid-lipopolysaccharide ABC transporter n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IML0_9PROT
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:CDB39262.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
ABC transporter
L3_072_000M1_scaffold_1621_28
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

22907..23848
DNA (942bp) protein (314aa)
Predicted glycosyltransferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJF5_9SPIR
Predicted glycosyltransferase {ECO:0000313|EMBL:CCY24947.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
family 2 glycosyl transferase
L3_072_000M1_scaffold_1621_29
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23859..24713
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XVM6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18770.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
family 2 glycosyl transferase
L3_072_000M1_scaffold_1621_30
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24920..25843
DNA (924bp) protein (308aa)
Integral membrane protein TerC family n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J4Y9_9PROT
Integral membrane protein TerC family {ECO:0000313|EMBL:CDB53764.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
integral membrane protein TerC
Displaying items 1-30 of 43 in total

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