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L3_072_000M1_scaffold_1696

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1696_1
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2545
DNA (2544bp) protein (848aa)
outer membrane adhesin like proteiin n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36F9A
Calcium binding hemolysin protein, putative {ECO:0000313|EMBL:EAQ01559.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
hypothetical protein
L3_072_000M1_scaffold_1696_2
GWE2_Gammaproteobacteria_42_36_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3047..3331
DNA (285bp) protein (95aa)
Integrase id=1861429 bin=GWE2_Gammaproteobacteria_42_36 species=Octadecabacter arcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
int; hypothetical protein
Tax=GWE2_Gammaproteobacteria_42_36_curated
L3_072_000M1_scaffold_1696_3
unknown

Not on your lists

3328..4284
DNA (957bp) protein (319aa)

This feature has no annotations

L3_072_000M1_scaffold_1696_4
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4776..5525)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Acinetobacter baumannii OIFC098 RepID=K5PP66_ACIBA
Uncharacterized protein {ECO:0000313|EMBL:EYT45526.1}; TaxID=1310720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 478810.;"
L3_072_000M1_scaffold_1696_5
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6246..7202)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X2A2_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO27338.2}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
glycosyl transferase 2 family protein
L3_072_000M1_scaffold_1696_6
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7192..7950)
DNA (759bp) protein (253aa)
coiled-coil 323..344 id=470423 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ22632.1}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
hypothetical protein
L3_072_000M1_scaffold_1696_7
unknown

Not on your lists

comp(7952..8764)
DNA (813bp) protein (271aa)

This feature has no annotations

L3_072_000M1_scaffold_1696_8
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8754..9839)
DNA (1086bp) protein (362aa)
Erythromycin biosynthesis sensory transduction protein EryC1 n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XA11_OXAFO
Erythromycin biosynthesis sensory transduction protein EryC1 {ECO:0000313|EMBL:EEO30037.1}; TaxID=556269 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_072_000M1_scaffold_1696_9
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(9836..11014)
DNA (1179bp) protein (393aa)
Radical SAM domain protein n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NIZ1_9MOLU
Radical SAM domain protein {ECO:0000313|EMBL:CDF12062.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
radical SAM protein
L3_072_000M1_scaffold_1696_10
GWC1_OD1_36_108, Parcubacteria, Bacteria

Not on your lists

comp(11011..12417)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=17 Tax=Vibrio cholerae RepID=F9BHU1_VIBCL
Uncharacterized protein {ECO:0000313|EMBL:KKP89565.1}; TaxID=1618894 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_108.;"
L3_072_000M1_scaffold_1696_11
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12418..14667)
DNA (2250bp) protein (750aa)
Uncharacterized protein n=2 Tax=Bartonella tamiae RepID=J0QXJ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJF90776.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
glycosyl transferase 2 family protein
L3_072_000M1_scaffold_1696_12
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14668..15972)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=17 Tax=Vibrio cholerae RepID=F9BHU1_VIBCL
Uncharacterized protein {ECO:0000313|EMBL:CDF29994.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;" source="Methanoculleus sp. CAG:1088.;"
L3_072_000M1_scaffold_1696_13
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15975..16910)
DNA (936bp) protein (312aa)
Uncharacterized protein n=3 Tax=Campylobacter coli RepID=H7VXT4_CAMCO
GNAT family acetyltransferase {ECO:0000313|EMBL:KDA34083.1}; TaxID=1365662 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter jejuni K5.;"
Hypothetical protein
L3_072_000M1_scaffold_1696_14
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16876..17148)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Campylobacter coli RepID=H7RT79_CAMCO
Uncharacterized protein {ECO:0000313|EMBL:KDA34084.1}; TaxID=1365662 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter jejuni K5.;"
hypothetical protein
L3_072_000M1_scaffold_1696_15
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17132..17935)
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Campylobacter coli RepID=H7RT79_CAMCO
Uncharacterized protein {ECO:0000313|EMBL:KDA34084.1}; TaxID=1365662 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter jejuni K5.;"
hypothetical protein
L3_072_000M1_scaffold_1696_16
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17964..18869)
DNA (906bp) protein (302aa)
Predicted protein n=1 Tax=Francisella novicida GA99-3549 RepID=A7JJ38_FRANO
Uncharacterized protein {ECO:0000313|EMBL:KAJ51372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
L3_072_000M1_scaffold_1696_17
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18873..19544)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Campylobacter coli RepID=H7RT78_CAMCO
Sugar O-acyltransferase {ECO:0000313|EMBL:KDA34085.1}; TaxID=1365662 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter jejuni K5.;"
bacterial transferase hexapeptide family protein
L3_072_000M1_scaffold_1696_18
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19544..19762)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B4513B
Uncharacterized protein {ECO:0000313|EMBL:EGW51767.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
phosphopantetheine attachment site family protein
L3_072_000M1_scaffold_1696_19
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19767..20822)
DNA (1056bp) protein (352aa)
Beta-ketoacyl-acyl-carrier-protein synthase III (EC:2.3.1.180)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B5640A
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
L3_072_000M1_scaffold_1696_20
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20819..21238)
DNA (420bp) protein (140aa)
WblP protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8J0_9GAMM
WblP protein {ECO:0000313|EMBL:EAR28905.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas tunicata D2.;"
hypothetical protein
L3_072_000M1_scaffold_1696_21
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

21537..22532
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R582_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ29816.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_1696_22
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(22529..23092)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QU03_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ29814.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_1696_23
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(23049..24725)
DNA (1677bp) protein (559aa)
Xaa-Pro aminopeptidase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QME3_9PROT
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CCZ29813.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
X-Pro aminopeptidase
L3_072_000M1_scaffold_1696_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(24730..25593)
DNA (864bp) protein (288aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RA47_9PROT
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:CCZ29812.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
50S ribosomal protein L20
L3_072_000M1_scaffold_1696_25
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

25706..26452
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R578_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ29811.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_1696_26
unknown

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comp(26593..26832)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_072_000M1_scaffold_1696_27
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27230..27946
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein BN570_01742 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZK2_9PROT
Probable transcriptional regulatory protein BN570_01742 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L3_072_000M1_scaffold_1696_28
unknown

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comp(27972..28091)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_072_000M1_scaffold_1696_29
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

28204..28692
DNA (489bp) protein (163aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTZ1_9PROT
crossover junction endodeoxyribonuclease RuvC
L3_072_000M1_scaffold_1696_30
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

28709..29410
DNA (702bp) protein (234aa)
Hydrolase HD n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMD9_9PROT
Hydrolase HD {ECO:0000313|EMBL:CCZ29808.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
putative HD superfamily hydrolase
Displaying items 1-30 of 40 in total

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