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L3_072_000M1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 215 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_12_1
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..382
DNA (381bp) protein (127aa)
Phage Tail Collar Domain protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X970_OXAFO
Phage Tail Collar Domain protein {ECO:0000313|EMBL:EEO29738.1}; TaxID=556269 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
L3_072_000M1_scaffold_12_2
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(826..1311)
DNA (486bp) protein (162aa)
50S ribosomal protein L9 n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J674_9PROT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
LSU ribosomal protein L9p
L3_072_000M1_scaffold_12_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(1327..1554)
DNA (228bp) protein (76aa)
30S ribosomal protein S18 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R729_9PROT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rpsR; 30S ribosomal protein S18
L3_072_000M1_scaffold_12_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(1566..1901)
DNA (336bp) protein (112aa)
30S ribosomal protein S6 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC92_9PROT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rpsF; 30S ribosomal protein S6
L3_072_000M1_scaffold_12_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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2124..2501
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QP59_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30458.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_12_6
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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2508..4031
DNA (1524bp) protein (508aa)
Mg chelatase related protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVU6_9PROT
Mg chelatase related protein {ECO:0000313|EMBL:CCZ30459.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
putative bifunctional enzyme and transcriptional regulator
L3_072_000M1_scaffold_12_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

4043..6097
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNZ5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30460.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_12_8
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6201..6731
DNA (531bp) protein (177aa)
ATP-dependent protease subunit HslV {ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|SAAS:SAAS00019493};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
ATP-dependent protease subunit HslV n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HNL5_9PROT
ATP-dependent protease subunit HslV
L3_072_000M1_scaffold_12_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6724..8031
DNA (1308bp) protein (436aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC97_9PROT
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hslU; ATPase component of the HslUV protease
L3_072_000M1_scaffold_12_10
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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8031..9113
DNA (1083bp) protein (361aa)
Putative oxygen-independent coproporphyrinogen III oxidase (HemN-like) n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QP64_9PROT
Putative oxygen-independent coproporphyrinogen III oxidase (HemN-like) {ECO:0000313|EMBL:CCZ30463.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
yggW; putative oxygen-independent coproporphyrinogen III oxidase YggW
L3_072_000M1_scaffold_12_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(9110..9331)
DNA (222bp) protein (74aa)
PF04070 domain protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTP9_9PROT
PF04070 domain protein {ECO:0000313|EMBL:CCZ29729.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_12_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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9422..10120
DNA (699bp) protein (233aa)
Pcmt-protein-L-isoaspartate o-methyltransferase putative n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM72_9PROT
Pcmt-protein-L-isoaspartate o-methyltransferase putative {ECO:0000313|EMBL:CCZ29728.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_12_13
unknown

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comp(10150..14103)
DNA (3954bp) protein (1318aa)

This feature has no annotations

L3_072_000M1_scaffold_12_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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14259..15161
DNA (903bp) protein (301aa)
Putative membrane protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVU9_9PROT
Putative membrane protein {ECO:0000313|EMBL:CCZ30464.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_12_15
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(15767..16801)
DNA (1035bp) protein (345aa)
DNA polymerase III n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QLV5_9PROT
DNA polymerase III {ECO:0000313|EMBL:CCZ29730.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
holA; DNA polymerase III subunit delta
L3_072_000M1_scaffold_12_16
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(16798..17343)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R502_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ29731.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_12_17
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17361..19814)
DNA (2454bp) protein (818aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6IVQ7_9PROT
L3_072_000M1_scaffold_12_18
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

19964..21250
DNA (1287bp) protein (429aa)
tRNA and rRNA cytosine-C5-methylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QLV8_9PROT
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:CCZ29735.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Fmu (Sun) domain-containing protein
L3_072_000M1_scaffold_12_19
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21250..22173
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HST5_9PROT
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:CDB40928.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L3_072_000M1_scaffold_12_20
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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22254..23324
DNA (1071bp) protein (357aa)
Glycosyl transferase family 4 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R9W5_9PROT
Glycosyl transferase family 4 {ECO:0000313|EMBL:CCZ29737.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_12_21
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

23321..24679
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM80_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ29738.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
copper amine oxidase domain protein
L3_072_000M1_scaffold_12_22
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(24720..25034)
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTR0_9PROT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
trxA; Thioredoxin-1
L3_072_000M1_scaffold_12_23
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25132..28509)
DNA (3378bp) protein (1126aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
ATP-dependent exoDNAse beta subunit n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J3H4_9PROT
ATP-dependent exoDNAse beta subunit
L3_072_000M1_scaffold_12_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(28499..31378)
DNA (2880bp) protein (960aa)
Inactivated superfamily I helicase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R9X5_9PROT
Inactivated superfamily I helicase {ECO:0000313|EMBL:CCZ29742.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_12_25
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists


comp(31362..31979)
DNA (618bp) protein (206aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM86_9PROT
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
L3_072_000M1_scaffold_12_26
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(31979..32692)
DNA (714bp) protein (238aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rph; Ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTR5_9PROT
L3_072_000M1_scaffold_12_27
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(32911..34950)
DNA (2040bp) protein (680aa)
Glycogen synthase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QLW5_9PROT
Glycogen synthase {ECO:0000313|EMBL:CCZ29745.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
glycogen/starch synthase, ADP-glucose type
L3_072_000M1_scaffold_12_28
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

35102..35689
DNA (588bp) protein (196aa)
Protein GrpE n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R517_9PROT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
grpE; molecular chaperone
L3_072_000M1_scaffold_12_29
unknown

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comp(35726..35965)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_072_000M1_scaffold_12_30
unknown

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comp(36086..36301)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 215 in total

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